Transcript Information: S_Transcript_45560.p1


Annotated TAIR IDAT1G76450.1
Annotated Gene NamePhotosystem II reaction center PsbP family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:28684618-28686109 | Forward length=247
E-Value2.6E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.9482219973624
Replicate 28.6946953921241
Replicate 34.7242476667351
Condition 2: 8 Hour
Replicate 12.7313307795343
Replicate 24.9592767920576
Replicate 32.3100918586679
Condition 3: 24 Hour
Replicate 14.9500721210213
Replicate 24.3541312880667
Replicate 33.9758887732203


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_45560.p1 GENE.S_Transcript_45560~~S_Transcript_45560.p1 ORF type:complete len:203 (+),score=24.24,PsbP|PF01789.12|1.4e-05 S_Transcript_45560:871-1479(+)
ATGACATGCCAGCGGCTGTGCCCTCGCCCTCCCATGTGCTGCTTCACCTTCACTTCTCATATTCGCAGTAACAAATCAGGCATTACGACAAACATGGGAAGCAGAAAGCAACGACAATTTGTTATCTGCTCTCTTCCAAACAGTCAAGCTGTTACTACTACAAGAAGAGTGGCCACCCTGCAGATAGCCTTATCTGCACTTTACTTTTCGCATAATGCTGCTGCTCTGGCCCTGCCTCTCACTGATGCTCCTCCTGACTTTCGCCTTTACTCTGATGATGTCAATAAGTACCACATTTTCATTCCTCAAGATTGGCAAGTTGGAGCAGGGGAAACTAACGGATTCAAATCACTTACTGCATTTTACCCTGATGCAGCTTCTACTTCAAATGGTAACTATCATGCTCTTTGTTGGTCTTTTTTGGCGTCATTAATCAATGGTATTGGATCAATTTTCCTAATATTGCAGTCAGTGTGGCAATCACCGGTCTCGGTCCCGATTTCACCAGATTGGAATCATTTGGCAAGGTTGATGAATTTGCGGAAAATCTGGTTAACGGACTGGATAGAAGTTGGCAGAGGCCACCTGGGTTGGCAGCAAAGCTCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_45560.p1 GENE.S_Transcript_45560~~S_Transcript_45560.p1 ORF type:complete len:203 (+),score=24.24,PsbP|PF01789.12|1.4e-05 S_Transcript_45560:871-1479(+)
MTCQRLCPRPPMCCFTFTSHIRSNKSGITTNMGSRKQRQFVICSLPNSQAVTTTRRVATLQIALSALYFSHNAAALALPLTDAPPDFRLYSDDVNKYHIFIPQDWQVGAGETNGFKSLTAFYPDAASTSNGNYHALCWSFLASLINGIGSIFLILQSVWQSPVSVPISPDWNHLARLMNLRKIWLTDWIEVGRGHLGWQQSS*

Click here to download the sequence:
Link to NCBI Protein BLAST