Transcript Information: S_Transcript_4557.p1


Annotated TAIR IDAT3G02650.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:568135-569865 | Forward length=576
E-Value3.9E-175
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.135056280474
Replicate 218.605946954033
Replicate 318.641045073747
Condition 2: 8 Hour
Replicate 120.146106059964
Replicate 218.660389879219
Replicate 319.220280405721
Condition 3: 24 Hour
Replicate 115.469264653094
Replicate 216.815086008258
Replicate 315.226211138572


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_4557.p1 GENE.S_Transcript_4557~~S_Transcript_4557.p1 ORF type:5prime_partial len:651 (+),score=143.96,PPR_2|PF13041.2|4.8e-06,PPR_2|PF13041.2|5.3,PPR_2|PF13041.2|3.9,PPR_2|PF13041.2|0.015,PPR_2|PF13041.2|4.1e-13,PPR_2|PF13041.2|0.056,PPR_2|PF13041.2|2.8e-11,PPR_2|PF13041.2|0.00044,PPR|PF01535.16|0.067,PPR|PF01535.16|0.85,PPR|PF01535.16|3.6e+02,PPR|PF01535.16|4.8e+03,PPR|PF01535.16|0.0016,PPR|PF01535.16|1.9e-05,PPR|PF01535.16|0.00042,PPR|PF01535.16|1.2e-09,PPR|PF01535.16|0.29,PPR_1|PF12854.3|2.3e+03,PPR_1|PF12854.3|0.16,PPR_1|PF12854.3|4e+02,PPR_1|PF12854.3|0.9,PPR_1|PF12854.3|0.023,PPR_1|PF12854.3|2.9e-07,PPR_1|PF12854.3|1.6e-08,PPR_1|PF12854.3|1.4,PPR_3|PF13812.2|3.6,PPR_3|PF13812.2|13,PPR_3|PF13812.2|0.3,PPR_3|PF13812.2|0.0053,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|5.2e-06,PPR_3|PF13812.2|0.0076 S_Transcript_4557:3-1955(+)
AGCTTGAAAAAAAAAAAGGAAAATAAAGAAAATCACTTCTGGCTTGGCTATCGACTCGTAGCAGGAACCCAAAAACCCTACTCGAACTCATCGCTCTTCAACCTTCGCAAACCCACGAACTACATCAAACAAACACAAATAGAGAGCTACCAAGAGAGAAAAGATACAGAGAGAGAAATAATGTGGAGATCCATCGCATCGAGATCTTCTCTTCCCAGACACCTGGGTCGAAAGCTGCTTATCCCTCTCCAAAACCCACCACCACAATCATCATCAACATCTCAGGTACTACTACTTCACAAAACCCTTAATCCATCTTCACATTTTGCACAACCCACGAAATTCCCACTTCAAAATGTCAGATTTTTCTCACAATCATCTATTAGTGAATTTGAAACTGAACCACATGATGCTAGTTCTTCTTCTTCTGAGGAGTTAGACCTTGAAAATGGTAATATGTCTAAGGGTTTTGGTCAGACCTATGACGTTAGTTCTTCCCAAGACTTGGGATTGTCTATTGAATTTGATGGTATTAGTGAAAATAATGATGCCCAGATGGTTAGTTTTGGCTCTAATGATTTGAGTCCTAATGACGAGATTGATGTTGAAAAGTTGGAAAATGTGTTGTCTTTGCTTCAAAGTAGCCTAGATGAGTCTTTAGAGTCTAGTCTTGATAGAATGGATTTGGTTTTGAATGAGGAGTTTGTGATGAGAGTGTTGGAAACTCCTCTTGTTCCTGGGGATCATTTGATTAACTTTTTCAAATGGGGTTTAAGTAGGAATGAGTTTAAGGTGAGTTCGTCAGTTTTGGGTGGTCTTGTACGTGCCATTTGTAATGAACCGAAAAGGAATAATGCCTATGCATTGTGGGATTTGGTTAAGGAGATTGGTGAGAAGGAGAAGGGTGTTGTTAGTTCTGAAATGCTCAATGAGTTGATATCTGCTTTTTCGATGTTGGGTAAGGGAAAAGCTGCGTTTGAGGTATTTGGAAAGTTTGAGGAACTTGGGTGCGTTCCGAATGAGGATACATATTATTATACCATTGAAGCACTTTGTAGGAGATCCTTTTTTGATTGGGCTATGTCAGTTTGCCAGAAAATGATCGATGCTGGGGTTCTGCCGGATAGTAAGAAGGTTGGTGCGATCATATCTTTCTTCTGCAAAGGCCGTAGAGAGAAGGAGGCCCATGTTGTATACCTCGCAGCAAAGGAGAAAAATCGATATCCTCCTCAGAAGGCTGTTAATTTTTTGATAAGCTGTCTCTCGAAGGTGGATGAAACTGTGCCCTTGGCTCAAGAGATGCTAGTTGATTTCTCAGTCGAAGTTCGTAAGCGTGCCATCAATCCGTTCTCATGGGTCATTACTGGTTTGTGTAGGAAAAAGGACACCGAGGGTGCGAAGAAGTTACTGTTTGAGATGATAGAGAAAGGCCCACCTCCTGGAAATGGAGTCTTTAATTCCATTATAAACTGTCTTTCGAAAGCTAGGGACTTGGAGGATGCAAAGGAGATGATGAAAGTGATGGAGAGCAGGGGTATCAAGCCTGATGTCTACACTTACAGTGTTATAATGAGTGGTTATGCAAAGGGGGGCGCAATGGAAGAAGCTTGCAAATTCTTGTCAGAGGCCAAAAAGAAACATGACAAGCTGTGTCCTGTAACTTTCCACACATTAATTCGAGGATACTGTAAACTAGGAGAATTTGACAAGGCCTTGAAATTGTTGAGTGAGATGAAGAACTGTGGGGTTGAAGCTAATGTAGACGAGTACAATAAGTTGATCCAGTCACTGTGCTTGAAGGCTTTGGATTGGGAAGCAGCAGAGAAGCTGCTGGAAGACATGAAAGCAAAAGGCTTGCATCTCCCTGGTATTACACGAGGCCTCATAAAAGCCGTAAAGGAGTTGGAACAAGAGGAGGCAGTTGTATCTGAAGAAGCTGTTGCCAAAGCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_4557.p1 GENE.S_Transcript_4557~~S_Transcript_4557.p1 ORF type:5prime_partial len:651 (+),score=143.96,PPR_2|PF13041.2|4.8e-06,PPR_2|PF13041.2|5.3,PPR_2|PF13041.2|3.9,PPR_2|PF13041.2|0.015,PPR_2|PF13041.2|4.1e-13,PPR_2|PF13041.2|0.056,PPR_2|PF13041.2|2.8e-11,PPR_2|PF13041.2|0.00044,PPR|PF01535.16|0.067,PPR|PF01535.16|0.85,PPR|PF01535.16|3.6e+02,PPR|PF01535.16|4.8e+03,PPR|PF01535.16|0.0016,PPR|PF01535.16|1.9e-05,PPR|PF01535.16|0.00042,PPR|PF01535.16|1.2e-09,PPR|PF01535.16|0.29,PPR_1|PF12854.3|2.3e+03,PPR_1|PF12854.3|0.16,PPR_1|PF12854.3|4e+02,PPR_1|PF12854.3|0.9,PPR_1|PF12854.3|0.023,PPR_1|PF12854.3|2.9e-07,PPR_1|PF12854.3|1.6e-08,PPR_1|PF12854.3|1.4,PPR_3|PF13812.2|3.6,PPR_3|PF13812.2|13,PPR_3|PF13812.2|0.3,PPR_3|PF13812.2|0.0053,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|5.2e-06,PPR_3|PF13812.2|0.0076 S_Transcript_4557:3-1955(+)
SLKKKKENKENHFWLGYRLVAGTQKPYSNSSLFNLRKPTNYIKQTQIESYQERKDTEREIMWRSIASRSSLPRHLGRKLLIPLQNPPPQSSSTSQVLLLHKTLNPSSHFAQPTKFPLQNVRFFSQSSISEFETEPHDASSSSSEELDLENGNMSKGFGQTYDVSSSQDLGLSIEFDGISENNDAQMVSFGSNDLSPNDEIDVEKLENVLSLLQSSLDESLESSLDRMDLVLNEEFVMRVLETPLVPGDHLINFFKWGLSRNEFKVSSSVLGGLVRAICNEPKRNNAYALWDLVKEIGEKEKGVVSSEMLNELISAFSMLGKGKAAFEVFGKFEELGCVPNEDTYYYTIEALCRRSFFDWAMSVCQKMIDAGVLPDSKKVGAIISFFCKGRREKEAHVVYLAAKEKNRYPPQKAVNFLISCLSKVDETVPLAQEMLVDFSVEVRKRAINPFSWVITGLCRKKDTEGAKKLLFEMIEKGPPPGNGVFNSIINCLSKARDLEDAKEMMKVMESRGIKPDVYTYSVIMSGYAKGGAMEEACKFLSEAKKKHDKLCPVTFHTLIRGYCKLGEFDKALKLLSEMKNCGVEANVDEYNKLIQSLCLKALDWEAAEKLLEDMKAKGLHLPGITRGLIKAVKELEQEEAVVSEEAVAKA*

Click here to download the sequence:
Link to NCBI Protein BLAST