Transcript Information: S_Transcript_45579.p1


Annotated TAIR IDAT3G02510.1
Annotated Gene NameRegulator of chromosome condensation (RCC1) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:522086-524536 | Reverse length=393
E-Value5.1E-249
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 158.169384379186
Replicate 252.771048814412
Replicate 352.794091842368
Condition 2: 8 Hour
Replicate 163.5420663139
Replicate 269.677207977164
Replicate 368.99175102681
Condition 3: 24 Hour
Replicate 135.018515519273
Replicate 238.753387733602
Replicate 349.481415359655


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_45579.p1 GENE.S_Transcript_45579~~S_Transcript_45579.p1 ORF type:complete len:393 (+),score=102.88,RCC1|PF00415.14|1.4e-06,RCC1|PF00415.14|2.6e-13,RCC1|PF00415.14|5e-09,RCC1|PF00415.14|91,RCC1|PF00415.14|0.0053,RCC1|PF00415.14|2.9e-15,RCC1|PF00415.14|1.4e-17,RCC1|PF00415.14|5.9e-11,RCC1_2|PF13540.2|0.55,RCC1_2|PF13540.2|1.4e-07,RCC1_2|PF13540.2|6.7e-07,RCC1_2|PF13540.2|8.4e-08,RCC1_2|PF13540.2|2.1e-09,RCC1_2|PF13540.2|3e-08,RCC1_2|PF13540.2|4.3e-08,RCC1_2|PF13540.2|0.71 S_Transcript_45579:224-1402(+)
ATGACTTCAAACACCGCCGTCATCGCTTGGGGGTCAGGTGAAGATGGGCAATTGGGTATAGGTAACAATGAAGATAAAGAATGGGTTTGTCAAGTTCAAGCCCTTCGACCTTATCGTGTCTCTTCTATTGTTGCTGGTAGTCGCAACTCTCTTGCTATTTGCCAAGATGGCAAGTTGTTTACATGGGGATGGAACCAAAGAGGGACTCTGGGACACCCACCTGAGACTAAGACTGAAAATGTACCTAGCCAGGTTAAAGCTCTTGCCAATGTCAAAATTGTACAGGCAGCAATTGGTGGATGGCATTGCTTGGCTGTTGATGATAAAGGCCGTGCTTATGCTTGGGGTGGAAACGAGTATGGGCAGTGTGGTGAAGAGCCAGATAAGAAGGATGACTCTGGTAGACCCTTGAGAAGAGATATTGTGATACCTCAGCGCTGTGCCCCTAAGCTCACAGTTCGTCAGGTGGCTGCTGGGGGTACACATTCAGTGGTTCTCACACAGGAAGGACATGTATGGACTTGGGGTCAACCATGGCCACCTGGAGACATAAAGAAAATTTTTGTTCCTGTTCGAGTACAAGGACTTGAAAGAGTGCAGCTAATTGCGGTGGGTGCATTTCATAATTTGGCACTTGAAGAAGATGGCACCTTGTGGGCATGGGGCAATAATGAGTATGGACAGCTTGGAACTGGAGATACTCAACCAAGATCCCTGCCTATTCGCGTGCAGGGGCTATCTGGTCTTACACTGGTTGATATTGCTGCTGGTGGTTGGCATTCTACTGCATTAACAAGTGAAGGGGAGGTGTATGGCTGGGGTAGAGGTGAACACGGAAGGCTGGGGTTTGGTGATGACAAGAGCAGTAAAATGGTGCCACAAAAGGTTCAGCTTTTAGCTGGAGAAGACATTGTTCAGGTGTCTTGTGGAGGTACTCATTCAGTTGCATTGACACGTGATGGACGCATTTTTTCTTTTGGGCGAGGTGACCATGGCCGTCTAGGGTATGGCAGGAAAGTAACAACTGGGCACCCAATGGAAGTGCCAATAAACCTCCCTCCAAAGAGTGTTGGCGATGATGAGAATGCTCAAGGGCATTGGCAGGCTGAGCTTGTTGCTTGTGGTGGCCGTCATACTTTGGCAATCGTTGAATGGCGGCAGTCCAATGATCCTGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_45579.p1 GENE.S_Transcript_45579~~S_Transcript_45579.p1 ORF type:complete len:393 (+),score=102.88,RCC1|PF00415.14|1.4e-06,RCC1|PF00415.14|2.6e-13,RCC1|PF00415.14|5e-09,RCC1|PF00415.14|91,RCC1|PF00415.14|0.0053,RCC1|PF00415.14|2.9e-15,RCC1|PF00415.14|1.4e-17,RCC1|PF00415.14|5.9e-11,RCC1_2|PF13540.2|0.55,RCC1_2|PF13540.2|1.4e-07,RCC1_2|PF13540.2|6.7e-07,RCC1_2|PF13540.2|8.4e-08,RCC1_2|PF13540.2|2.1e-09,RCC1_2|PF13540.2|3e-08,RCC1_2|PF13540.2|4.3e-08,RCC1_2|PF13540.2|0.71 S_Transcript_45579:224-1402(+)
MTSNTAVIAWGSGEDGQLGIGNNEDKEWVCQVQALRPYRVSSIVAGSRNSLAICQDGKLFTWGWNQRGTLGHPPETKTENVPSQVKALANVKIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCGEEPDKKDDSGRPLRRDIVIPQRCAPKLTVRQVAAGGTHSVVLTQEGHVWTWGQPWPPGDIKKIFVPVRVQGLERVQLIAVGAFHNLALEEDGTLWAWGNNEYGQLGTGDTQPRSLPIRVQGLSGLTLVDIAAGGWHSTALTSEGEVYGWGRGEHGRLGFGDDKSSKMVPQKVQLLAGEDIVQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGHPMEVPINLPPKSVGDDENAQGHWQAELVACGGRHTLAIVEWRQSNDPE*

Click here to download the sequence:
Link to NCBI Protein BLAST