Transcript Information: S_Transcript_45590.p1


Annotated TAIR IDAT4G30825.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:15009605-15012319 | Forward length=904
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.5552822250486
Replicate 26.9925781111249
Replicate 37.4980304077589
Condition 2: 8 Hour
Replicate 110.604429064804
Replicate 211.149249158159
Replicate 311.251972014433
Condition 3: 24 Hour
Replicate 19.4780532740611
Replicate 210.749829753153
Replicate 39.1791702589111


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_45590.p1 GENE.S_Transcript_45590~~S_Transcript_45590.p1 ORF type:complete len:915 (+),score=175.26,PPR|PF01535.16|70,PPR|PF01535.16|0.0083,PPR|PF01535.16|0.09,PPR|PF01535.16|0.26,PPR|PF01535.16|0.11,PPR|PF01535.16|0.00022,PPR|PF01535.16|0.0014,PPR|PF01535.16|0.0005,PPR|PF01535.16|11,PPR|PF01535.16|1.4e+02,PPR|PF01535.16|36,PPR|PF01535.16|19,PPR|PF01535.16|0.15,PPR|PF01535.16|0.17,PPR|PF01535.16|9.1e+03,PPR|PF01535.16|0.0003,PPR|PF01535.16|0.00047,PPR|PF01535.16|0.0037,PPR|PF01535.16|0.0017,PPR|PF01535.16|0.0014,PPR|PF01535.16|6.5e-08,PPR|PF01535.16|5.8,PPR_2|PF13041.2|1.2,PPR_2|PF13041.2|0.0015,PPR_2|PF13041.2|0.00032,PPR_2|PF13041.2|0.34,PPR_2|PF13041.2|75,PPR_2|PF13041.2|0.021,PPR_2|PF13041.2|3e-12,PPR_2|PF13041.2|0.7,PPR_2|PF13041.2|0.54,PPR_2|PF13041.2|2e+02,PPR_2|PF13041.2|0.00036,PPR_2|PF13041.2|0.013,PPR_2|PF13041.2|1.7e-10,PPR_2|PF13041.2|0.015,PPR_2|PF13041.2|1.3e-08,PPR_2|PF13041.2|1.9e-11,PPR_2|PF13041.2|48,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|0.0053,PPR_3|PF13812.2|3.7,PPR_3|PF13812.2|1.8e+02,PPR_3|PF13812.2|1.8e+03,PPR_3|PF13812.2|4.6,PPR_3|PF13812.2|0.013,PPR_3|PF13812.2|0.02,PPR_3|PF13812.2|21,PPR_3|PF13812.2|1.2e+03,PPR_3|PF13812.2|50,PPR_3|PF13812.2|23,PPR_3|PF13812.2|8.4,PPR_3|PF13812.2|0.00077,PPR_3|PF13812.2|3.9,PPR_3|PF13812.2|0.41,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|0.28,PPR_3|PF13812.2|0.001,PPR_3|PF13812.2|2e+03,PPR_1|PF12854.3|8e+03,PPR_1|PF12854.3|9.6,PPR_1|PF12854.3|35,PPR_1|PF12854.3|5.9,PPR_1|PF12854.3|7.1e+03,PPR_1|PF12854.3|10,PPR_1|PF12854.3|6.8e-05,PPR_1|PF12854.3|0.0096,PPR_1|PF12854.3|1.8e+03,PPR_1|PF12854.3|0.0003,PPR_1|PF12854.3|3.1e+02,PPR_1|PF12854.3|0.0016,PPR_1|PF12854.3|0.11,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|0.062,PPR_1|PF12854.3|2.4e-07,PPR_1|PF12854.3|39,TPR_7|PF13176.2|5.2e+02,TPR_7|PF13176.2|1.1e+03,TPR_7|PF13176.2|2.7e+02,TPR_7|PF13176.2|2.8,TPR_7|PF13176.2|1.1e+03,TPR_7|PF13176.2|2.1e+03,TPR_7|PF13176.2|1.6e+02 S_Transcript_45590:189-2933(+)
ATGGCCTCATTGCATTTGTCCTTTTGTTTGGATCCTTATGAACCGAAGAGGCTCAATTTCTGTGTAAGTTCTCATTTATCTGATGGTTTGCACTTTACCCAGTTCCTAAATTGCCCTAATGCAAGTGGGTCTTGTGTATTTTACTCTCTTTCTAAGGTTAACCATGTCAAAGCTACTTCCTTGAATGATGGTCATGTTGAATCATTGGATGATGGGTTACTTAGTGAGGGTTTGATTGCCCCCAAAAGGAATTCTTCCTCCCATCGAGCGGCAGGTGGTAAGAATGTAGGGAAGAGGGTTCATGTTGGGAGAAAAGTAGTGGTGGGGGGAAAGGAGAGATGTAAGCTTGATCCTATGGGGCTTTCCAATGAGCACGATAAAGATGGTGTTTGTCATGAAGTAGATGTTGGTGTCTTTGGTATCGGTCCCGAGTCAAGTTTAGTGTCTTGCAATAAGGTGTTGAGAGGCTTGGAAAGGGGTAATGATGATGACAAAGTGATGAAATTGTTTGAGTGGATGAGGAGCCAGGGGAAGTTAGAAGGCAATTTGACGGCTTACAATCTCGTTTTGCGGGTGTTAGGAAGGAGAAGTGATTGGGATGCTGCGGAGAAATTGATTGAGGAAATGAAATTCAAATCAGGGTGTGAGCTCGAGTTTCAGGTCTTTAACACCATTATTTATGCTTGTTCTAAGAAGGGACTTGTGGATATAAGTAGTAAATGGTTGCATATAATGCTGGATTATGGTGTTGAGCCTACTGTTGCGACTTTTGGTATGCTTATGAGTTTGTACCAAAAAGGTTGGAATGCTGAGGAGGCAGAGTTTGTGTTTTCCCAAATGAGGAACCTGAATGTTCGGTGTCAGTCTGCGTACTCAGCGATGATCACGATTTATACCCGATTGGGTTTGCATACCAAGGCAGAAGAGGTTATTTCCCTGTTATTCAAGGATGAAGTTGCTTTGAATCTTGAGAACTGGCTGGTTATGCTAAATTCTTATAGCCAACAAGGAAAGATGGAAGAAGCTGAACAAATATTGGTTTCAATGTGTGAAGCAGGTTTTACCCCAAGTATAGTTGCATACAACACACTGATTACTGGATATGGGAAGGTATCCAATATGAATGCTGCTGAAAGGGTATTAAAGAACCTAAAGAATGTAGGAGTTGAACCTGATGAAACAACATACAGGTCCATGATTGAAGGTTGGGCGAGATTTGGGAATTATGAGAAAGCAAAATGGTATTATGAGAAGCTCAAAGATCTTGGATTTAAACCAAATTCATCTAACTTATACTCATTGATAAACTTGCAAGCTAAACATGAGGACGAAGATGGTGCTAGTAGGACTCTTGATGATATGATGAAGATGGGTTGCCAACCATCCTCCATCCTTGGCTCCCTTATACAAGCATATGAGAAAGCTGGAAGGTTTGTTAGGGTACCTGTAATTCTGCAGGGTTCACTTTATGAACATGTGCTGACTAACCAGACTGCATGCTCAATTTTGGCTATGGCTTATGTGAAGCACTCCCTGGTGTATGATGCTATAAAGCTCCTAGAACTTAAGCACTGGAAGGATTCAGCCTTCCAGGACAACTTGTACCATCTATTAATTTGTTCATGCAAGGAACTGGGCCATTTGGAGAATGCTGTCACAATTTTCACCCATATGCCCAAGTTGGATGGTAAGCTGAACCTGCATGTTCTTTCCACGATGATTGACATCTTCAGTATGATGAACCGGTTTTCTGATGCAGACAGTATCTACCAACAGTTAAAGTCTTCAGGAGTTGTTTTGGACATGGTTGCTTACAGTATTGTTGTTCGGATGTATATGAAAGCTGGATTGTTGAATGATGCGTGCTGTGTTTTAGATAGTATGGACAACCAGACTAACATAGTCCCTGACATTTATCTCTTGCGTGACATGCTTAGATTATATCAAAAATGCAATAAACGAGACAAGTTGGCAGACTTGTATTATAAGATCTTGAAGAGTGGAGTAACTTGGGACCAGGAAATGTACAATTGTGTCATCAATTGTTGTGCTCATGCTTTGCCGGTTGATGAGCTCTCCAGGCTTTTTGATGAAATGATTCAGAGGGGGTTCACCCCTAACACTATCACCTATAATGTTATGCTTGATGTTTATGGGAAGTCCAGGCTTTTCAGGAAGGCTAGAAAAGTCTTTTGGATGGCCAGGAAACAGGGATTGGCCGATGTGATCTCTTACAATACTCTTATAGCAGCATATGGTCAAAACAAAGATTTCAGGAAGATGACGACCACTGTTAAACTGATGCAGTTCAATGGATTTGCTGTGTCCCTTGAAGCTTACAATTGTATGTTGGATGCTTATGGAAAAGAGCGTCAAATGGATGATTTCAAAAGTGTCTTGCAAAGACTGAAGGAGTCAAGTTGTACTTCTGATCATTATACCTACAATATTCTGATTAACATATATGGGGAGCAAGGTTGGATTGAAGAAGTGGCTACTGTGTTGACAGAGCTAAAAGAGTACGGACCAGGACCAGATTTGTGCAGCTATAATACATTGATAAAGGCATATGGGATTGCAGGAATGATTGAAGATGCTGTTTCTGTGGTGAAAGAAATGAGGGAAAATGGGACTGATCCTGATAGGATCACCTATGTCAATTTGATATCTGCCTTACGGAGGAATGACAAGTTTCTTGAGGCAGTCAGATGGTCGCTGTGGATGAAGCAGATGGGATTTGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_45590.p1 GENE.S_Transcript_45590~~S_Transcript_45590.p1 ORF type:complete len:915 (+),score=175.26,PPR|PF01535.16|70,PPR|PF01535.16|0.0083,PPR|PF01535.16|0.09,PPR|PF01535.16|0.26,PPR|PF01535.16|0.11,PPR|PF01535.16|0.00022,PPR|PF01535.16|0.0014,PPR|PF01535.16|0.0005,PPR|PF01535.16|11,PPR|PF01535.16|1.4e+02,PPR|PF01535.16|36,PPR|PF01535.16|19,PPR|PF01535.16|0.15,PPR|PF01535.16|0.17,PPR|PF01535.16|9.1e+03,PPR|PF01535.16|0.0003,PPR|PF01535.16|0.00047,PPR|PF01535.16|0.0037,PPR|PF01535.16|0.0017,PPR|PF01535.16|0.0014,PPR|PF01535.16|6.5e-08,PPR|PF01535.16|5.8,PPR_2|PF13041.2|1.2,PPR_2|PF13041.2|0.0015,PPR_2|PF13041.2|0.00032,PPR_2|PF13041.2|0.34,PPR_2|PF13041.2|75,PPR_2|PF13041.2|0.021,PPR_2|PF13041.2|3e-12,PPR_2|PF13041.2|0.7,PPR_2|PF13041.2|0.54,PPR_2|PF13041.2|2e+02,PPR_2|PF13041.2|0.00036,PPR_2|PF13041.2|0.013,PPR_2|PF13041.2|1.7e-10,PPR_2|PF13041.2|0.015,PPR_2|PF13041.2|1.3e-08,PPR_2|PF13041.2|1.9e-11,PPR_2|PF13041.2|48,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|0.0053,PPR_3|PF13812.2|3.7,PPR_3|PF13812.2|1.8e+02,PPR_3|PF13812.2|1.8e+03,PPR_3|PF13812.2|4.6,PPR_3|PF13812.2|0.013,PPR_3|PF13812.2|0.02,PPR_3|PF13812.2|21,PPR_3|PF13812.2|1.2e+03,PPR_3|PF13812.2|50,PPR_3|PF13812.2|23,PPR_3|PF13812.2|8.4,PPR_3|PF13812.2|0.00077,PPR_3|PF13812.2|3.9,PPR_3|PF13812.2|0.41,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|0.28,PPR_3|PF13812.2|0.001,PPR_3|PF13812.2|2e+03,PPR_1|PF12854.3|8e+03,PPR_1|PF12854.3|9.6,PPR_1|PF12854.3|35,PPR_1|PF12854.3|5.9,PPR_1|PF12854.3|7.1e+03,PPR_1|PF12854.3|10,PPR_1|PF12854.3|6.8e-05,PPR_1|PF12854.3|0.0096,PPR_1|PF12854.3|1.8e+03,PPR_1|PF12854.3|0.0003,PPR_1|PF12854.3|3.1e+02,PPR_1|PF12854.3|0.0016,PPR_1|PF12854.3|0.11,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|0.062,PPR_1|PF12854.3|2.4e-07,PPR_1|PF12854.3|39,TPR_7|PF13176.2|5.2e+02,TPR_7|PF13176.2|1.1e+03,TPR_7|PF13176.2|2.7e+02,TPR_7|PF13176.2|2.8,TPR_7|PF13176.2|1.1e+03,TPR_7|PF13176.2|2.1e+03,TPR_7|PF13176.2|1.6e+02 S_Transcript_45590:189-2933(+)
MASLHLSFCLDPYEPKRLNFCVSSHLSDGLHFTQFLNCPNASGSCVFYSLSKVNHVKATSLNDGHVESLDDGLLSEGLIAPKRNSSSHRAAGGKNVGKRVHVGRKVVVGGKERCKLDPMGLSNEHDKDGVCHEVDVGVFGIGPESSLVSCNKVLRGLERGNDDDKVMKLFEWMRSQGKLEGNLTAYNLVLRVLGRRSDWDAAEKLIEEMKFKSGCELEFQVFNTIIYACSKKGLVDISSKWLHIMLDYGVEPTVATFGMLMSLYQKGWNAEEAEFVFSQMRNLNVRCQSAYSAMITIYTRLGLHTKAEEVISLLFKDEVALNLENWLVMLNSYSQQGKMEEAEQILVSMCEAGFTPSIVAYNTLITGYGKVSNMNAAERVLKNLKNVGVEPDETTYRSMIEGWARFGNYEKAKWYYEKLKDLGFKPNSSNLYSLINLQAKHEDEDGASRTLDDMMKMGCQPSSILGSLIQAYEKAGRFVRVPVILQGSLYEHVLTNQTACSILAMAYVKHSLVYDAIKLLELKHWKDSAFQDNLYHLLICSCKELGHLENAVTIFTHMPKLDGKLNLHVLSTMIDIFSMMNRFSDADSIYQQLKSSGVVLDMVAYSIVVRMYMKAGLLNDACCVLDSMDNQTNIVPDIYLLRDMLRLYQKCNKRDKLADLYYKILKSGVTWDQEMYNCVINCCAHALPVDELSRLFDEMIQRGFTPNTITYNVMLDVYGKSRLFRKARKVFWMARKQGLADVISYNTLIAAYGQNKDFRKMTTTVKLMQFNGFAVSLEAYNCMLDAYGKERQMDDFKSVLQRLKESSCTSDHYTYNILINIYGEQGWIEEVATVLTELKEYGPGPDLCSYNTLIKAYGIAGMIEDAVSVVKEMRENGTDPDRITYVNLISALRRNDKFLEAVRWSLWMKQMGFD*

Click here to download the sequence:
Link to NCBI Protein BLAST