Transcript Information: S_Transcript_45610.p1


Annotated TAIR IDAT3G47110.1
Annotated Gene NameLeucine-rich repeat protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:17347103-17350296 | Reverse length=1025
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1482784129603
Replicate 22.1531156074201
Replicate 32.5775390189129
Condition 2: 8 Hour
Replicate 12.8519497893997
Replicate 23.88138096882
Replicate 33.5440806861294
Condition 3: 24 Hour
Replicate 11.1580420163689
Replicate 20.70995072407835
Replicate 31.0331921804505


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_45610.p1 GENE.S_Transcript_45610~~S_Transcript_45610.p1 ORF type:complete len:830 (+),score=114.07,Pkinase|PF00069.21|3.5e-41,Pkinase_Tyr|PF07714.13|2.6e-37,LRR_8|PF13855.2|0.00084,LRR_8|PF13855.2|2.2e-05,LRR_8|PF13855.2|0.0005,LRR_8|PF13855.2|9.9e-05,LRR_8|PF13855.2|2.5e+02,LRR_8|PF13855.2|0.0036,LRR_8|PF13855.2|2.6e-07,LRR_4|PF12799.3|7.6e+03,LRR_4|PF12799.3|1.5e+03,LRR_4|PF12799.3|12,LRR_4|PF12799.3|0.02,LRR_4|PF12799.3|0.0077,LRR_4|PF12799.3|2.7e+02,LRR_4|PF12799.3|43,LRR_4|PF12799.3|0.26,LRR_4|PF12799.3|3,LRR_4|PF12799.3|0.0033,LRR_4|PF12799.3|3.1e-05,LRR_4|PF12799.3|0.077,LRR_1|PF00560.29|1.4e+03,LRR_1|PF00560.29|59,LRR_1|PF00560.29|3.4e+02,LRR_1|PF00560.29|1.7e+02,LRR_1|PF00560.29|87,LRR_1|PF00560.29|72,LRR_1|PF00560.29|20,LRR_1|PF00560.29|3.4e+03,LRR_1|PF00560.29|60,LRR_1|PF00560.29|0.081,LRR_1|PF00560.29|0.028,LRR_1|PF00560.29|9.6e+03,LRR_1|PF00560.29|3.7e+03 S_Transcript_45610:561-3050(+)
ATGTCCCGCAATAGTTTCACAGGATCACTCTTTGACGCCATAGGGAACCTTACCTCCTTGCAAGTAATATCTTCCTTAATGAATGCGTTTACAGGAGTTATCCCCTCTGATAGCATTGCAAGGATGAGAAACCTACGCATATTTAATGTCGGAGAAAATGCATTCTCTGGTCCACTTCCCCAATCTATTTTCAATCTTTCCTATCTTCAGAAACTAGAAATTGATGGTAATCAACTTGAAGGAAGTCTTCCACCGGATATAGGCTTTCAACTTCCTCAGCTAAGAATGCTGAATATTTTCCAGAATCAAATGACAGGACCAATTCCAACCTCCATATCAAACCTCACAAGCCTAGAATATCTTTCGCTGGGCTTCAATAATTTCACAGGAATGATGCAGGTTGATTTCGGACGTCTACAGAGCCTATACGAAGTTGAATTTTCAGCCAACCACCTATTTGGTGACCTCAGCTTTATAGATACTCTGGTCAACTGTAGCAACTTGGTAAACCTTGGTTTTGCTTACAATCATTTTACAGGAGAATTACCAAAAGCTTTAGCCAATCTCTCCAACTTAGCAGGGCTTGTGCTTCACCAAAATCAACTAAGGGGAAGAATTCCTATGGCTATTACCAATTTTGTCAACCTTGAGATGTTAGCTATGGATTTCAACAAATTCACAGGCACCATTCCTCATGATATTGGGAAGCTTCAGAACCTGGGGTACGCAGGTTTCAGCTTCAACAGTCTATCCGGTAGAATTCCTAACTCTTTCAACAATTTATCACATTTGACCAGGCTTTTACTAGGTGGAAACAAATTCCAAGGAAGAATACCTCCAGAGCTTGGGAATTGCCACAGCTTGTTGTACTTAGATCTATCACATAATGAATTCAATGGAACCTTACCAAATGAAATCTTTGGAGGATCAGCTAAATTTATTGAGGTAAATCTGTCCCGAAACAACATAGGAGGATCTCTGCCTCTGATCAGCCAGCAAACAAATCTAATAAGATTAGATGTGTCTAAAAATAAGCTGGCAGGGGAAGTTCCAAATGGCCTTGGCAAATGTCCTACCCTTCAGTACCTAAATATGGAAGGAAATTCATTCCATGGAGATATTCCTCCATCATTCTCTTCTTTGGAAAGCCTTCAAACACTTGACCTTTCACATAACAATCTCTCTGGCCCAATACCAAAATACTTCTCTAAATTTCCTTTGGTAAATCTAGTCTTATCTTACAACAATTTTGAGGGTAGGGTTCCAACAAATGGAGTCTTTGCAAATGCAAGTGCAATATCTCTAGTTGGAAACACTAAGATTTGTGGAGGAATTCCTGAGCTACATTTACCAATATGCACGGAGAAAGAAGGGAAGAAAAGAAGGATGCCTCTGACACTCAAGTTGACGGTTTCATTAATATGTGCACTTGTTGTGGGGGTAGCCATGGGAGTATGGATGTACTTGACTTGTCACAAACCCAAAAGAAAATCTGTTGACACTTGTTTACCGATCAGTGATGCATTCTTAAAAGTCTCCTACAACATGTTGCTCAAAGCAACAGATGGCTTCTCCTCTGAAAATCTGCTGGGTACTGGAGCTTTTGGGTCTGTGTTCAAAGGGTTCTTAGAACCTTATGGAAGGACAGTAGCAGTGAAAGTACTCAACCTTCAACATAAAGGTGCTTCTAAGAGTTTCATAGCAGAGTGTAAGGCCTTGAGAAATATCCGACATCGAAATATAGTGGGAATCCTAAGTGCTTGCTCTAGTACTGATTTTCAAGGAAATGATTTCAAAGCTCTTGTATACGAGTTCATGCCCAATGGAAGTCTTGAAAGATGGTTACACTATGTCGGAAATCTAAGTCTTGGTCAAAGGGTGGACATAGCTATTGATGTTGGCTGTGCACTCGACTATCTGCACAATGGCTGCGAGTTTCCAATGAGGCACTGTGACCTAAAACCAAGCAACATTTTGCTTGATGATGACATGGTCGCTCACGTGGGTGACTTTGGATTAGCTAAGTTTCTCTTTCAACATCAAAACCTAACTCAAAGCAGTTCAATGGGAATCAGGGGAACAGTTGGCTATGTTGCTCCAGAGTATGGCCTACAAGGTGAAGCATCAACAGATGGTGACATCTACAGTTTTGGCATTCTGCTGATAGAGCTCATGACAAGGAACAGACCTACTGACAACATGTTCAAGGAAGGTTTCGACCTTCATATCTACGCCAAGGAAGCTTTGCCTGACCACGTGTTGAAAATTGTTGACCCAGTTCTTATAGAGAATGAAAGTGAAGAAATCCAGGAAAGAAGGTCAATTAAAGCCACACTTGAACAAAGGGTTGAGTGCGTGGTGGCTGTGGTTAACATTGGAGTGGCATGTTCCAACCCGTCACCACGAGATCGGATGAAGATAACTGATGCCATAAGAGAGCTGCAACAAGCTAGAGACATCATTTCAAATGCAAGACACAAGCGTACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_45610.p1 GENE.S_Transcript_45610~~S_Transcript_45610.p1 ORF type:complete len:830 (+),score=114.07,Pkinase|PF00069.21|3.5e-41,Pkinase_Tyr|PF07714.13|2.6e-37,LRR_8|PF13855.2|0.00084,LRR_8|PF13855.2|2.2e-05,LRR_8|PF13855.2|0.0005,LRR_8|PF13855.2|9.9e-05,LRR_8|PF13855.2|2.5e+02,LRR_8|PF13855.2|0.0036,LRR_8|PF13855.2|2.6e-07,LRR_4|PF12799.3|7.6e+03,LRR_4|PF12799.3|1.5e+03,LRR_4|PF12799.3|12,LRR_4|PF12799.3|0.02,LRR_4|PF12799.3|0.0077,LRR_4|PF12799.3|2.7e+02,LRR_4|PF12799.3|43,LRR_4|PF12799.3|0.26,LRR_4|PF12799.3|3,LRR_4|PF12799.3|0.0033,LRR_4|PF12799.3|3.1e-05,LRR_4|PF12799.3|0.077,LRR_1|PF00560.29|1.4e+03,LRR_1|PF00560.29|59,LRR_1|PF00560.29|3.4e+02,LRR_1|PF00560.29|1.7e+02,LRR_1|PF00560.29|87,LRR_1|PF00560.29|72,LRR_1|PF00560.29|20,LRR_1|PF00560.29|3.4e+03,LRR_1|PF00560.29|60,LRR_1|PF00560.29|0.081,LRR_1|PF00560.29|0.028,LRR_1|PF00560.29|9.6e+03,LRR_1|PF00560.29|3.7e+03 S_Transcript_45610:561-3050(+)
MSRNSFTGSLFDAIGNLTSLQVISSLMNAFTGVIPSDSIARMRNLRIFNVGENAFSGPLPQSIFNLSYLQKLEIDGNQLEGSLPPDIGFQLPQLRMLNIFQNQMTGPIPTSISNLTSLEYLSLGFNNFTGMMQVDFGRLQSLYEVEFSANHLFGDLSFIDTLVNCSNLVNLGFAYNHFTGELPKALANLSNLAGLVLHQNQLRGRIPMAITNFVNLEMLAMDFNKFTGTIPHDIGKLQNLGYAGFSFNSLSGRIPNSFNNLSHLTRLLLGGNKFQGRIPPELGNCHSLLYLDLSHNEFNGTLPNEIFGGSAKFIEVNLSRNNIGGSLPLISQQTNLIRLDVSKNKLAGEVPNGLGKCPTLQYLNMEGNSFHGDIPPSFSSLESLQTLDLSHNNLSGPIPKYFSKFPLVNLVLSYNNFEGRVPTNGVFANASAISLVGNTKICGGIPELHLPICTEKEGKKRRMPLTLKLTVSLICALVVGVAMGVWMYLTCHKPKRKSVDTCLPISDAFLKVSYNMLLKATDGFSSENLLGTGAFGSVFKGFLEPYGRTVAVKVLNLQHKGASKSFIAECKALRNIRHRNIVGILSACSSTDFQGNDFKALVYEFMPNGSLERWLHYVGNLSLGQRVDIAIDVGCALDYLHNGCEFPMRHCDLKPSNILLDDDMVAHVGDFGLAKFLFQHQNLTQSSSMGIRGTVGYVAPEYGLQGEASTDGDIYSFGILLIELMTRNRPTDNMFKEGFDLHIYAKEALPDHVLKIVDPVLIENESEEIQERRSIKATLEQRVECVVAVVNIGVACSNPSPRDRMKITDAIRELQQARDIISNARHKRT*

Click here to download the sequence:
Link to NCBI Protein BLAST