Transcript Information: S_Transcript_456220.p2


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value4E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.32063856909856
Replicate 20.62023906386588
Replicate 30.22220163956145
Condition 2: 8 Hour
Replicate 10.42822068909906
Replicate 20.62892747179954
Replicate 30.59924069572237
Condition 3: 24 Hour
Replicate 10.52638273471311
Replicate 20.45509661799894
Replicate 30.50646675512281


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_456220.p2 GENE.S_Transcript_456220~~S_Transcript_456220.p2 ORF type:complete len:249 (+),score=39.50,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|1.4e-12 S_Transcript_456220:1211-1957(+)
ATGCTGGATAAAGTGCTGAGCAGAATTCACAGCTTGTCTGCCAAGATGCTCTCTTATACAGGGAGACTTCAGCTCATTAAATCTGTTATTTTTGGTATCCAAGCCTTTTGGGTTCAAGTGATGCTTTTACCAAAAAAAGTTCTAAAGAGCATTGAGAGTGAATGTCTCAGGTACTTATGGGCTGGGAATGAAGACAAAAAACCAGCTAAAGTGTCTTGGACTTCAGTTTGTACTCCAGGAACAGCAGGAGGATTAAATGTGTTGAATCTACATGTTTGGAACAAAGAAGCAATATTTAAACTGTTTTGGGCTGTTCATCAGGGGAAAGAAGCTCTATGGATTCAATGGATCCACATGTATTTCATTAAGGGGAAACCTATACAAGAGATTAGGATTTCAAATAGTCTTTCTTGGATGCTCCAGCAAGTTCTGCATTGCAGGGACCTGCTAAGCCAGGTTCAGGATGCTATAAGGGGTCCTGATACTACAATCAAAGAGATTTATAGGGTGCTGCAGGGTGACTTTGTGAAGGTAAAATGGAGAAATGTGATCTGCAAAAATGCTGCCAAGCCTAAAGCTTGCTTCTCTTTATGGCTTTTACTCTTACAGAGACATTATACCAAAGATAGACTTGGCAAATGGGGGATCACCAATGACAAAATTTGTGAACTCTGTAGAAGTAAAGAGGAATCCCATGAGCATTGGTATTTGAGTGCTGCTATACTAGGCAGATATGGGAGGGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_456220.p2 GENE.S_Transcript_456220~~S_Transcript_456220.p2 ORF type:complete len:249 (+),score=39.50,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|1.4e-12 S_Transcript_456220:1211-1957(+)
MLDKVLSRIHSLSAKMLSYTGRLQLIKSVIFGIQAFWVQVMLLPKKVLKSIESECLRYLWAGNEDKKPAKVSWTSVCTPGTAGGLNVLNLHVWNKEAIFKLFWAVHQGKEALWIQWIHMYFIKGKPIQEIRISNSLSWMLQQVLHCRDLLSQVQDAIRGPDTTIKEIYRVLQGDFVKVKWRNVICKNAAKPKACFSLWLLLLQRHYTKDRLGKWGITNDKICELCRSKEESHEHWYLSAAILGRYGRE*

Click here to download the sequence:
Link to NCBI Protein BLAST