Transcript Information: S_Transcript_45626.p1


Annotated TAIR IDAT5G65290.1
Annotated Gene NameLMBR1-like membrane protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:26089814-26094337 | Forward length=733
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.0760898225836
Replicate 28.9567485492894
Replicate 37.7502548522524
Condition 2: 8 Hour
Replicate 111.257372061055
Replicate 210.010749391317
Replicate 39.5382197454197
Condition 3: 24 Hour
Replicate 18.8116196700062
Replicate 27.9367433535847
Replicate 39.1597567229994


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_45626.p1 GENE.S_Transcript_45626~~S_Transcript_45626.p1 ORF type:5prime_partial len:771 (+),score=108.56,LMBR1|PF04791.12|1.4e-92 S_Transcript_45626:2-2314(+)
ATTTCTCAAGCTCAAACAAAGCAAAAGTCCACCCCACCCACCATCGCAGAGCAAGTCGGAGCTCTCTTCTTCTTCTTCTTCTTCCACCGAACAAGAGGAGAGAGAAAGAGAGAGATGTGGGTGTTTTATTTGATCTCGTTACCCCTAACGTTAGGGATGGTGGTGATCACCCTTAAATACTTCGCAGGACCTCATGTTCCTCGTTATGTCTTCTTCACCGTCGGTTACGCCTGGTTCTGTTCTCTCTCCATTATCATCCTCGTCCCCGCCGACATTTGGACGACAATTCTTGGCCACTATAATCGTGTAATTTCTTTCTTTTGGAGCTGGTCATATTGGAGCACATTTCTTTTGACTTGGGCTGTGGTCCCCCTTATTCAGGGTTATGAAGATGCTGGAGACTTCACAATGACTGAAAGATTAAAGACCAGTGTTCACGTGAACCTAGTCTTTTATCTAATTGTTGGATCAATAGGTCTTATTGGACTCATACTTCTTATCACCATGCGCAAGAACTGGGGTGGAGGTGTCCTTGGTTTTGCGATGGCCTGCTCAAACACCTTTGGACTTGTTACAGGAGCCTTTTTACTCGGTTTTGGTTTAAGTGAAATTCCACGGAGCCTCTGGAAAAATGCGGATTGGACTTACCGTCAGAAAGTACTTTCCCATAAGATTGCCAAAATGGCTGTGAAACTGGATGATGCTCACCAGAACTTCTCGAATGCAATTGTGGTTGCCCAAGCAACATCCACTCAAATGTCGAAACGTGATCCTTTGAGGCCGTACATGGACGTTATAGACAAAATGCTGGATCAAATGTTCAAAGAAGATCCATCCTTCAAGCCTCAAGGGGGAAGATTGGGGGAAAATGATATGGACTATGATGCGGATGATAAATCAATGGCTGCACTTAGGCGCCAGCTTAGAGTAGCACAGGAGGAGTACTATCGCTACAAGAGTGAATATATGACATACGTCTTGGAGGCCCTTGAACTAGAAGACACCATCAAGAATTATGAACGGCGTGATGCAATTGGATGGAAGTATGTCTCGAGTCTGCGAGGTAGTCGTCCTGGCACAGTGGGCTCTGCCTTAGACACTATTGAGTTATTATGGCGCTGTATCTTGAGGAAACAACTTCAAAAACTGTTGGCTATAATACTTGGTTGCATGTCAGTTGCAATTCTTTTGGCAGAAGCAACTTTGCTTCCTAGTGGAGTTGATTTGTCTCTTTTTTCAATTCTGATCAAGTCTGTGGGAAGGCAGGAGTTGTTTGTGCAGGTTTTTGCATTTATTCCTTTGATGTACATGTGCATATGCACATACTATTCGTTGTTGAAAATCGGAATGCTGATGTTTTACTCATTGACACCAAGACAAACTAGCTCTGTCAACCTGCTTATGATTTGCTCGATGGTTGCACGTTATGCCCCACCAATTTCTTACAACTTTCTAAATCTTATCCGCCTTGATAGGAATGCTAAAACCATCTTTGAGAAGCGAATGGGAAATATAGATGATGCTGTCCCCTTCTTTGGGACAGGGTTCAACAGAATCTATCCCCTTATTATGGTTATTTACACAATTCTGGTTGCGAGTAATTTCTTTGATCGAGTGATTGATTTTTTTGGAAGCTGGAAGAGATTCAAGGTTCAAAGTGAAGCGGATGATATGGATGGTTTTGATCCATCAGGGATGATCATTTTACAGAAAGAACGCTCATGGCTTGAACAAGGACACAAAGTTGGGGAGCAAGTTATACCGTTGGCAAGGAATTTCAACAATGTAAGCGTGGATGTTGAGTCTGCCATGAATAGGAAGGATGAAAATGTGGTAGAGATGAAAGGGTCTTCATCTAAGGACGGTAACAAAGGAAGTCTGTCAAAGACATCTAAAGTTGAGGTTCGGCAATACAGTGGGAACAGGGAGGCGATCAGCCACAAGTACTCTGTAATGAGAGAACAGGGCAAACATACATCCAGCACAAAGCCAGCAGAGACTACTATAGCTTCTGCTAAGGTCTCGTTACTGAATTCTGGGAACTTGGATTCTGCCAGTGCTTCAGAAGGCCAATCATCTGGGTTCTCTTCTACATGGCAGACAATGAAGACGGGCTTCCAGAATTTCAAGGCAAACATGGGGTCAAAGAAGTTTCTTCCTTTAGGACAAAGCCAAGAACCAAAACTTCTCTCCCACGATTCCTCCTCAGAATCTCTGGATGAAATATTCCAGAGATTGAAACGCCCTACTGTAAACCATGTCACATATGATGATGACGATGATGATATTGAGATCAGGAATTCAACAAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_45626.p1 GENE.S_Transcript_45626~~S_Transcript_45626.p1 ORF type:5prime_partial len:771 (+),score=108.56,LMBR1|PF04791.12|1.4e-92 S_Transcript_45626:2-2314(+)
ISQAQTKQKSTPPTIAEQVGALFFFFFFHRTRGERKREMWVFYLISLPLTLGMVVITLKYFAGPHVPRYVFFTVGYAWFCSLSIIILVPADIWTTILGHYNRVISFFWSWSYWSTFLLTWAVVPLIQGYEDAGDFTMTERLKTSVHVNLVFYLIVGSIGLIGLILLITMRKNWGGGVLGFAMACSNTFGLVTGAFLLGFGLSEIPRSLWKNADWTYRQKVLSHKIAKMAVKLDDAHQNFSNAIVVAQATSTQMSKRDPLRPYMDVIDKMLDQMFKEDPSFKPQGGRLGENDMDYDADDKSMAALRRQLRVAQEEYYRYKSEYMTYVLEALELEDTIKNYERRDAIGWKYVSSLRGSRPGTVGSALDTIELLWRCILRKQLQKLLAIILGCMSVAILLAEATLLPSGVDLSLFSILIKSVGRQELFVQVFAFIPLMYMCICTYYSLLKIGMLMFYSLTPRQTSSVNLLMICSMVARYAPPISYNFLNLIRLDRNAKTIFEKRMGNIDDAVPFFGTGFNRIYPLIMVIYTILVASNFFDRVIDFFGSWKRFKVQSEADDMDGFDPSGMIILQKERSWLEQGHKVGEQVIPLARNFNNVSVDVESAMNRKDENVVEMKGSSSKDGNKGSLSKTSKVEVRQYSGNREAISHKYSVMREQGKHTSSTKPAETTIASAKVSLLNSGNLDSASASEGQSSGFSSTWQTMKTGFQNFKANMGSKKFLPLGQSQEPKLLSHDSSSESLDEIFQRLKRPTVNHVTYDDDDDDIEIRNSTR*

Click here to download the sequence:
Link to NCBI Protein BLAST