Transcript Information: S_Transcript_4564.p1


Annotated TAIR IDAT3G10420.2
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)SPD1
Annotation TypeHomolog
Chromosome Positionchr3:3239307-3242274 | Forward length=684
E-Value2E-100
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 149.289167968115
Replicate 259.138719938191
Replicate 363.34916151793
Condition 2: 8 Hour
Replicate 132.619014183307
Replicate 229.123116572425
Replicate 337.397330265544
Condition 3: 24 Hour
Replicate 195.587522729553
Replicate 281.200816032416
Replicate 386.933969621184


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_4564.p1 GENE.S_Transcript_4564~~S_Transcript_4564.p1 ORF type:5prime_partial len:338 (+),score=83.43 S_Transcript_4564:2-1015(+)
AGACGAAGAAAGGTGCAGAAGACAGTGCTTGAGAGGAAAGGTCCTCCGACATTTACATGTGCTGTTGAAATGATATCTAAAACTGAATGTCGTGTCCATCACAGATTGGATGCAACAGTTGATGCAATTCTTGCAGGAAAATCTCCTCTTTTTGAGATCCGTCACATGGATCCTGATGCCAAAAGCTCTGCGAAATCAAGTGAGACCCCTGAACAGCAGCAGCTACTACAAGTATCTGAGTTCATTAAAAATGAAAACAGAATTGCCCAAATTGAATCTGAGGATGAAGATGCAGATATTAGCCATCATGCCAAGAGGAGAAGCATAAGAGCTCCAAGAAAGAGCAGCTCACCAGTTTGTGTTTACACTTATAAGATATTGGAAGCTGATTTATTGCAAGTAGCAGAGGTGATGGGGCTTGAGGATATCATAGATGTTACAGATGACATTGGAACGGCAGACGCAATCCTAGCTTCCAGTTCAGAGATGAAGCAGAACCCTTGGATCCGTGGGGTGGCTAAGTTTCACCAAGTTCCAATCTTCGTTATCAAGTCAAATACCATGGCACAAATGGTTAAGGCGATCCGTATGATTCTTGGAATCGAGTCTTTTGCCTCGGTTGCCAAGCTTCCATCAAAAGATGTACTTGACATAGAGATTGAAGATGATGCACCTGAAAGCAAACCATCATTGGAAGAGCTCGATGCTCTAGAGGAAGTTCGTCTTGCAATCGAGTATATTGTGATCCCGGGTGGAGAGGCAGTAGAACTTCTTCCACGACGTTCGGAGATAATTGCACGACAGCTTGAGCTCGTGGAGAGTTACCAGCTGGCTGCGGAGAACTCGGGTACAGAACTAAACCCCAGGTTGCAAATTCTTCCATCTAAATCCAAGAAGAAGAGTCCATTGAGATCATCCAAAAATGGATTTTCCAATGATGAAACAAGCTTTAAATTACCAAGCAGTGCCAAAGAAGGCACAACAGTTTCTCGATTGCCGCTCCTGCCAGAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_4564.p1 GENE.S_Transcript_4564~~S_Transcript_4564.p1 ORF type:5prime_partial len:338 (+),score=83.43 S_Transcript_4564:2-1015(+)
RRRKVQKTVLERKGPPTFTCAVEMISKTECRVHHRLDATVDAILAGKSPLFEIRHMDPDAKSSAKSSETPEQQQLLQVSEFIKNENRIAQIESEDEDADISHHAKRRSIRAPRKSSSPVCVYTYKILEADLLQVAEVMGLEDIIDVTDDIGTADAILASSSEMKQNPWIRGVAKFHQVPIFVIKSNTMAQMVKAIRMILGIESFASVAKLPSKDVLDIEIEDDAPESKPSLEELDALEEVRLAIEYIVIPGGEAVELLPRRSEIIARQLELVESYQLAAENSGTELNPRLQILPSKSKKKSPLRSSKNGFSNDETSFKLPSSAKEGTTVSRLPLLPE*

Click here to download the sequence:
Link to NCBI Protein BLAST