Transcript Information: S_Transcript_456585.p1


Annotated TAIR IDAT1G09900.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:3218133-3219929 | Forward length=598
E-Value2E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.40983857963557
Condition 2: 8 Hour
Replicate 10
Replicate 20.16571739733131
Replicate 30.63158066977723
Condition 3: 24 Hour
Replicate 10.8090697589109
Replicate 20.33576017150144
Replicate 30.37365991711283


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_456585.p1 GENE.S_Transcript_456585~~S_Transcript_456585.p1 ORF type:internal len:135 (-),score=28.86,PPR_2|PF13041.2|0.00056,PPR_2|PF13041.2|0.0024,PPR_2|PF13041.2|4e-06,PPR_2|PF13041.2|3.4,PPR_1|PF12854.3|1.1e-05,PPR_1|PF12854.3|0.00024,PPR_1|PF12854.3|83,PPR_1|PF12854.3|3.9e+03,PPR|PF01535.16|65,PPR|PF01535.16|0.0066,PPR|PF01535.16|0.017,PPR|PF01535.16|3.9,PPR|PF01535.16|2.9e+03,PPR_3|PF13812.2|3.4e+02,PPR_3|PF13812.2|0.22,PPR_3|PF13812.2|33,PPR_3|PF13812.2|48 S_Transcript_456585:2-403(-)
TTGGATCAGTTTAGGAAAATGAGGAGAAAAGGTTGTGTTCCTAATTGTAGGACATTTGAGATTGTTATATGTGGCCTTGTGGCTTCAAATAGGGCGGATGAAGCATTGGGTGTGATGAATGAGATGTTTGTAAATGGGGTTGATCTTGATGAGAGTTTCTATAATGATGTTATACCACTGCTGTGTGGAGAGAATAAACTTGGAGAAGCAATGAGGCTGTTTGAAATGATGAGAGTTTCACAATTCAAGCCTGATTATTGTGTTTACGAATCTCTTGTTAAATGTTTGAGTGCAAATCATTGTTTCAGTGAAGTGACTGAGCTCTTTTGTGAGTATAGGAATGGTGGGTTTAGTCCTTCAAAGGACATGATCATGGATGTTATAGTTGCATACTGTAAACTA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_456585.p1 GENE.S_Transcript_456585~~S_Transcript_456585.p1 ORF type:internal len:135 (-),score=28.86,PPR_2|PF13041.2|0.00056,PPR_2|PF13041.2|0.0024,PPR_2|PF13041.2|4e-06,PPR_2|PF13041.2|3.4,PPR_1|PF12854.3|1.1e-05,PPR_1|PF12854.3|0.00024,PPR_1|PF12854.3|83,PPR_1|PF12854.3|3.9e+03,PPR|PF01535.16|65,PPR|PF01535.16|0.0066,PPR|PF01535.16|0.017,PPR|PF01535.16|3.9,PPR|PF01535.16|2.9e+03,PPR_3|PF13812.2|3.4e+02,PPR_3|PF13812.2|0.22,PPR_3|PF13812.2|33,PPR_3|PF13812.2|48 S_Transcript_456585:2-403(-)
LDQFRKMRRKGCVPNCRTFEIVICGLVASNRADEALGVMNEMFVNGVDLDESFYNDVIPLLCGENKLGEAMRLFEMMRVSQFKPDYCVYESLVKCLSANHCFSEVTELFCEYRNGGFSPSKDMIMDVIVAYCKL

Click here to download the sequence:
Link to NCBI Protein BLAST