Transcript Information: S_Transcript_45678.p1


Annotated TAIR IDAT2G44640.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, plasma membrane, plastid, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3769 (InterPro:IPR022244); BEST Arabidopsis thaliana protein match is: pigment defective 320 (TAIR:AT3G06960.1); Has 49 Blast hits to 48 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:18417286-18419063 | Forward length=451
E-Value5.6E-172
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.6633812531545
Replicate 29.8578421427194
Replicate 314.59722941085
Condition 2: 8 Hour
Replicate 113.112846386492
Replicate 214.898699200499
Replicate 313.379095837169
Condition 3: 24 Hour
Replicate 17.0182498022973
Replicate 27.8600027381801
Replicate 38.1569164884631


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_45678.p1 GENE.S_Transcript_45678~~S_Transcript_45678.p1 ORF type:complete len:470 (+),score=100.69 S_Transcript_45678:134-1543(+)
ATGGCGAACTTGAAAACATCAATGGACGCAGCATATGGGAGCTTAGACATAGCCAGTCCCCAAAACCTGGATGGCTACGCCAAGGCCATTCCTGGGCAAGACTTCCCTTTGGACAACTCTAGAGCTAGTCGAGCTTTGAGGGTCCAACAACTCTCCTTTCTTCGGAATGGGTTTCCTCTTGGAATCATTCCTTGCTTTGCTCCTTCACATTCTAACAAGGAACTTGGTTCTCTCTCTCTTCAATCCCTTCTTCTCAAACCCTCTTTCGGTGACTGGTGGCTTGGTTTAGTTGGGCAGTTCCGTCCGAAGAAATTAATATCAAACATTAAGGCAGAGCTGTTCACAAGTGATGAGTGGGAACTATCATCCTTCAAAGAAGCAGCAAAACATGTCTTGGGCAAATCGCTTTATGCCCTGGGTGCTTTTTCCCAGGTTCCTATCACATCCTCTTCTTCCTTGTTGTTGAGCTCAGAAGCTTATGGTGAGAGGAAAGGACGTCGCAATAAACTCATGCTGTTTCACCAGCTCCCCTACCATGACTTAACTCTGGAGGCAGCATGGCCACAGCTGTTCATTGACAGCAAAGGAAGATATTGGAATGTTCCTGAATCAGTGTCCTTAGATTTGCTATCTAGCATTTCTGAATCTGGACTACGTTATAATTTTGGATTACAAAAGAATGGTGGCCAACCTCAGGCTGCTGTTAATACAATAGATAGTGATGTCCCTGCTGCTTTGTTACCTGGATTACGTGCAAAGGCTGCTTTCTCATACGAGAAGAGCAAGGACTTATGGAGGCAAAAAGAGACTAAAGATGATCTTATCATACAGACTGAGAAAGGCGACTTCTGGCGTCCTGCATATGATGTACGCCTTAAAGAACCTCATGCATCCATTTCAGCTATTATTGGTGGTGCCTGTGGAGTGTGGTTTCTGGGTGAGAATGTTTTAAAGACTACATCAGAGGATGGCAGTGGCATTTCTTCTACTTCTGCAAAAAGAAGCCCTCTATTTGCTGATTTATTTGGCTCAGCGTGCTGTACTTTTCAGCATGGGAAGTTCAGGAAACGATTTGGGGATTTGACCAGGGTAGATGCCCGTCTAGATATATCTTCAGCTTCTGCTTATGCCAAACATATCTCAAGCTATTTCTGCAAGTCTTCTAATGTTAGCCGGGATGCCTCATTACCCCGACTGAGTCTCATCTTCCAGCAGCAGGTTGCAGGTCCAATTGTGTTCCGTATTGATGCAAGTGTACGTAACTCACCTGCCAAAGGTGTCTTGCATGTTGACGATATCATGTACAGCTTGAACTATTCCTTGCGGCTCTTGCAATCAGGAAAAGTCATGGTGTGGTACTCACCGAAGAGGAAAGAGGGAATGATTGAGTTGAGGCTGTTTGAGTTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_45678.p1 GENE.S_Transcript_45678~~S_Transcript_45678.p1 ORF type:complete len:470 (+),score=100.69 S_Transcript_45678:134-1543(+)
MANLKTSMDAAYGSLDIASPQNLDGYAKAIPGQDFPLDNSRASRALRVQQLSFLRNGFPLGIIPCFAPSHSNKELGSLSLQSLLLKPSFGDWWLGLVGQFRPKKLISNIKAELFTSDEWELSSFKEAAKHVLGKSLYALGAFSQVPITSSSSLLLSSEAYGERKGRRNKLMLFHQLPYHDLTLEAAWPQLFIDSKGRYWNVPESVSLDLLSSISESGLRYNFGLQKNGGQPQAAVNTIDSDVPAALLPGLRAKAAFSYEKSKDLWRQKETKDDLIIQTEKGDFWRPAYDVRLKEPHASISAIIGGACGVWFLGENVLKTTSEDGSGISSTSAKRSPLFADLFGSACCTFQHGKFRKRFGDLTRVDARLDISSASAYAKHISSYFCKSSNVSRDASLPRLSLIFQQQVAGPIVFRIDASVRNSPAKGVLHVDDIMYSLNYSLRLLQSGKVMVWYSPKRKEGMIELRLFEF*

Click here to download the sequence:
Link to NCBI Protein BLAST