Transcript Information: S_Transcript_45681.p1


Annotated TAIR IDAT2G44640.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, plasma membrane, plastid, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3769 (InterPro:IPR022244); BEST Arabidopsis thaliana protein match is: pigment defective 320 (TAIR:AT3G06960.1); Has 49 Blast hits to 48 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:18417286-18419063 | Forward length=451
E-Value2E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5720760223313
Replicate 20.93091939061244
Replicate 31.6341664884203
Condition 2: 8 Hour
Replicate 12.1595331966717
Replicate 22.8318795746489
Replicate 31.6189251345555
Condition 3: 24 Hour
Replicate 11.5669325710553
Replicate 20.66939527862629
Replicate 31.0642212829163


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_45681.p1 GENE.S_Transcript_45681~~S_Transcript_45681.p1 ORF type:3prime_partial len:237 (+),score=50.04 S_Transcript_45681:617-1324(+)
ATGGTGTCTAAATGTTACCGCGAAGTGGATGTTAAATTATTTGAATCTTCTTTCTCAACACAGCTCCCCTACCATGACTTAACTCTGGAGGCAGCATGGCCACAGCTGTTCATTGACAGCAAAGGAAGATATTGGAATGTTCCTGAATCAGTGTCCTTAGATTTGCTATCTAGCATTTCTGAATCTGGACTACGTTATAATTTTGGATTACAAAAGAATGGTGGCCAACCTCAGGCTGCTGTTAATACAATAGATAGTGATGTCCCTGCTGCTTTGTTACCTGGATTACGTGCAAAGGCTGCTTTCTCATACGAGAAGAGCAAGGACTTATGGAGGCAAAAAGAGACAAAAGATGATCTTATCGTACAGACTGAGAAAGGTGACTTCTGGCGTCCTGCATATGATGTACGCCTTAAAGAACCTCATGCATCCATTTCAGCTATTATTGGTGGTGCCTGTGGAGTGTGGTTTCTGGGTGAGAATGTTTTAAAGACTACATCAGAGGATGGCAGTGGCATTTCTTCTACTTCTGCAAAAAGAAGCCCTCTATTTGCTGATTTATTTGGCTCAGCGTGCTGTACTTTTCAGCATGGGAAGTTCAGGAAACGATTTGGGGATTTGACCAGGGTAGATGCCCGTCTAGATATATCTTCAGCTTCTGCTTATGCCAAACATATCTCAAGCTATTTCTGCAAGTCTTCTAATGTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_45681.p1 GENE.S_Transcript_45681~~S_Transcript_45681.p1 ORF type:3prime_partial len:237 (+),score=50.04 S_Transcript_45681:617-1324(+)
MVSKCYREVDVKLFESSFSTQLPYHDLTLEAAWPQLFIDSKGRYWNVPESVSLDLLSSISESGLRYNFGLQKNGGQPQAAVNTIDSDVPAALLPGLRAKAAFSYEKSKDLWRQKETKDDLIVQTEKGDFWRPAYDVRLKEPHASISAIIGGACGVWFLGENVLKTTSEDGSGISSTSAKRSPLFADLFGSACCTFQHGKFRKRFGDLTRVDARLDISSASAYAKHISSYFCKSSNV

Click here to download the sequence:
Link to NCBI Protein BLAST