Transcript Information: S_Transcript_45682.p1


Annotated TAIR IDAT2G44640.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, plasma membrane, plastid, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3769 (InterPro:IPR022244); BEST Arabidopsis thaliana protein match is: pigment defective 320 (TAIR:AT3G06960.1); Has 49 Blast hits to 48 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:18417286-18419063 | Forward length=451
E-Value2E-105
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.939654735902
Replicate 212.220241835115
Replicate 314.144053237047
Condition 2: 8 Hour
Replicate 112.934196633449
Replicate 216.652729438594
Replicate 314.637950485626
Condition 3: 24 Hour
Replicate 16.5698897716073
Replicate 27.6682069243281
Replicate 311.378365897045


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_45682.p1 GENE.S_Transcript_45682~~S_Transcript_45682.p1 ORF type:complete len:399 (+),score=77.69,DUF3769|PF12600.4|1.3e+03,DUF3769|PF12600.4|1.7e-05 S_Transcript_45682:1238-2434(+)
ATGATGTTGTTTTCTGCTATATTCATAATGTGTACCAATGAGGTGCTCTTAACTACTTACAGGTGGCTTGGTTTAGTTGGGCAGTTCCGTCCGAAGAAATTAATATCAAACATTAAGGCAGAGCTGTTCACAAGTGATGAGTGGGAACTATCATCCTTCAAAGAAGCAGCAAAACATGTCTTGGGCAAATCGCTTTATGCCCTGGGTGCTTTTTCCCAGGTTCCTATCACATCCTCTTCTTCCTTGTTGTTGAGCTCAGAAGCTTATGGTGAGAGGAAAGGACGTCGCAATAAACTCATGCTGTTTCACCAGCTCCCCTACCATGACTTAACTCTGGAGGCAGCATGGCCACAGCTGTTCATTGACAGCAAAGGAAGATATTGGAATGTTCCTGAATCAGTGTCCTTAGATTTGCTATCTAGCATTTCTGAATCTGGACTACGTTATAATTTTGGATTACAAAAGAATGGTGGCCAACCTCAGGCTGCTGTTAATACAATAGATAGTGATGTCCCTGCTGCTTTGTTACCTGGATTACGTGCAAAGGCTGCTTTCTCATACGAGAAGAGCAAGGACTTATGGAGGCAAAAAGAGACAAAAGATGATCTTATCGTACAGACTGAGAAAGGTGACTTCTGGCGTCCTGCATATGATGTACGCCTTAAAGAACCTCATGCATCCATTTCAGCTATTATCGGTGGTGCCTGTGGAGCGTGGTTTCTGGGTGAGAATGCTTTAAAGACTACATCAGAGGATGGCAGTGGCATTTCTTCTACTTCTGCAAAAAGAAGCCCTCTATTTGCTGATTTATTTGGCTCAGCGTGCTGTACTTTTCAGCATGGGAAGTTCAGGAAACGATTTGGGGATTTGACCAGGGTAGATGCCCGTCTAGATATATCTTCAGCTTCTGCTTATGCCAAACATATCTCAAGCTATTTCTGCAAGTCTTCTAATGTTAGCCGGGATGCCTCATTACCCCGACTGAGTCTCATCTTCCAGCAGCAGGTTGCAGGTCCAATTGTGTTCCGTATTGATGCAAGTGTACGTAACTCACCTGCCAAAGGTGTCTTGCATGTTGACGATATCATGTACAGCTTGAACTATTCCTTGCGGCTCTTGCAATCAGGAAAAGTCATGGTGTGGTACTCACCGAAGAGGAAAGAGGGAATGATTGAGTTGAGGCTGTTTGAGTTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_45682.p1 GENE.S_Transcript_45682~~S_Transcript_45682.p1 ORF type:complete len:399 (+),score=77.69,DUF3769|PF12600.4|1.3e+03,DUF3769|PF12600.4|1.7e-05 S_Transcript_45682:1238-2434(+)
MMLFSAIFIMCTNEVLLTTYRWLGLVGQFRPKKLISNIKAELFTSDEWELSSFKEAAKHVLGKSLYALGAFSQVPITSSSSLLLSSEAYGERKGRRNKLMLFHQLPYHDLTLEAAWPQLFIDSKGRYWNVPESVSLDLLSSISESGLRYNFGLQKNGGQPQAAVNTIDSDVPAALLPGLRAKAAFSYEKSKDLWRQKETKDDLIVQTEKGDFWRPAYDVRLKEPHASISAIIGGACGAWFLGENALKTTSEDGSGISSTSAKRSPLFADLFGSACCTFQHGKFRKRFGDLTRVDARLDISSASAYAKHISSYFCKSSNVSRDASLPRLSLIFQQQVAGPIVFRIDASVRNSPAKGVLHVDDIMYSLNYSLRLLQSGKVMVWYSPKRKEGMIELRLFEF*

Click here to download the sequence:
Link to NCBI Protein BLAST