Transcript Information: S_Transcript_45689.p1


Annotated TAIR IDAT5G15270.2
Annotated Gene NameRNA-binding KH domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4958738-4960947 | Forward length=548
E-Value5E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.3318316019464
Replicate 28.8346668141564
Replicate 39.5806421213509
Condition 2: 8 Hour
Replicate 111.21660140057
Replicate 210.750109086622
Replicate 310.104265423141
Condition 3: 24 Hour
Replicate 19.8349259005272
Replicate 29.7130621041489
Replicate 37.5884505894181


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_45689.p1 GENE.S_Transcript_45689~~S_Transcript_45689.p1 ORF type:complete len:462 (+),score=87.61,KH_1|PF00013.25|1.8e-10,KH_1|PF00013.25|1.1e-09,KH_1|PF00013.25|1.2e-12,KH_3|PF13014.2|9.2e-05,KH_3|PF13014.2|1.8e-06,KH_3|PF13014.2|8.3e-07,KH_2|PF07650.13|0.0094,KH_2|PF07650.13|0.023,KH_2|PF07650.13|0.012,KH_4|PF13083.2|0.85,KH_4|PF13083.2|6.6,KH_4|PF13083.2|4.4 S_Transcript_45689:90-1388(+)
ATGGCGCAACACCAAGGCCAACAACAGCAACAACAACAACAATACCCACCAACAATCCCCACAATCCAACCTTATTCTCACCACCATCACCAATATGAATATGTCCCTCAACCACCTCACCATTCTCTCCAACAACCCTCTCATCATCACCAACCCTTAACTCTCCCTTATGCCCACCAATACCACCCTCACCACCAACAATATGGGTCTGTCTCAGTCCCTGCAATGCCCATGGCCCAATATCAAATCCCGGCCCAGCCCACTTACTCTCACCACCACAACCACCACTACAACTCTGACAGGCCCACCTCCAAGCGGCCCCGAGAGCCCGTCTCGGCCGACACCGAAGCCCCCTCCACCAAGCGCCAGGCTTTGGGGAATGATGTGTTGTTTAGGGTTGTGGTACCTTCTTCTCAGATTGGTAAGGTTATTGGGAAAGCTGGTCATAGGGTTCAGAAAGTTAGGGAGGATACCAAGGCTACTGTCAAGATTGCTGATCCTATCGCTCGATACGAGGAACGTGTTATTATCATTAGTTCCAAGGCGAATGATGGTGGTATCACTGATGCAGAGAAGGCATTGCTTCAGATTGCTTCACTTATCCTTGCGGATGATGGAAGTAGTGCACCGACACTAAGTGTTAGTGCCGCAGTTGCTGCAGTTGATCCCTATGCAAATGCTGGTGTTGTGGCTGGGCTTGGTTCCGTTGGAGCTGCTGCTGGCATCAGTGCAGGTCATGTGCCTGCCAATTCAGTGAGGCTGTTAATAGCTGGTTCACAAGCAGGTGGTTTGATAGGCGTATCAGGTCAAAATATTGAAAAGCTTAGAAATTCCTCTGGTGCCACTATTACAGTTCTAGCCCCCAATCAATTACCATTGTGTGCATCTGCTCACGAATCTGACCGCTTGGTTCAGATATCAGGTGAAGTTCCTTCTGTACTGAAAGCCGTGGAGGAGATTGGTGCCGAGTTAAGAGCAAATCCACCCAACCAAGTAATTTCTATTAGCCCAACATACAACTTGAGTATTGCACGAGCAGCTCAGACATACATGGATCCAAATGCTGCAGAATATGTGACACTCGATATGGTAATCTCGGAAACTATGATTGGTGGCTTGATCGGTAGATCTGGTTCTAATATTTCAAAAATTAGAAATGAGTCTGGTGCAATGATAAAGGTGTTTGGTGAAAAAGGGGGGCAGAAACACAGGCAAATCCAGCTTATTGGTACCGCTCAGCAAGTAGCCCTTGCAAAACAGAGAGTTGATGAATACGTTTATTCTCAACTGACCCAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_45689.p1 GENE.S_Transcript_45689~~S_Transcript_45689.p1 ORF type:complete len:462 (+),score=87.61,KH_1|PF00013.25|1.8e-10,KH_1|PF00013.25|1.1e-09,KH_1|PF00013.25|1.2e-12,KH_3|PF13014.2|9.2e-05,KH_3|PF13014.2|1.8e-06,KH_3|PF13014.2|8.3e-07,KH_2|PF07650.13|0.0094,KH_2|PF07650.13|0.023,KH_2|PF07650.13|0.012,KH_4|PF13083.2|0.85,KH_4|PF13083.2|6.6,KH_4|PF13083.2|4.4 S_Transcript_45689:90-1388(+)
MAQHQGQQQQQQQQYPPTIPTIQPYSHHHHQYEYVPQPPHHSLQQPSHHHQPLTLPYAHQYHPHHQQYGSVSVPAMPMAQYQIPAQPTYSHHHNHHYNSDRPTSKRPREPVSADTEAPSTKRQALGNDVLFRVVVPSSQIGKVIGKAGHRVQKVREDTKATVKIADPIARYEERVIIISSKANDGGITDAEKALLQIASLILADDGSSAPTLSVSAAVAAVDPYANAGVVAGLGSVGAAAGISAGHVPANSVRLLIAGSQAGGLIGVSGQNIEKLRNSSGATITVLAPNQLPLCASAHESDRLVQISGEVPSVLKAVEEIGAELRANPPNQVISISPTYNLSIARAAQTYMDPNAAEYVTLDMVISETMIGGLIGRSGSNISKIRNESGAMIKVFGEKGGQKHRQIQLIGTAQQVALAKQRVDEYVYSQLTQ*

Click here to download the sequence:
Link to NCBI Protein BLAST