Transcript Information: S_Transcript_456937.p1


Annotated TAIR IDAT5G35080.1
Annotated Gene NameINVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mannose-6-phosphate receptor, binding (InterPro:IPR009011), Glucosidase II beta subunit-like (InterPro:IPR012913); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:13354552-13356725 | Reverse length=282
E-Value1E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.50177388981489
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.53326615473759
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_456937.p1 GENE.S_Transcript_456937~~S_Transcript_456937.p1 ORF type:5prime_partial len:85 (+),score=5.88 S_Transcript_456937:3-257(+)
GGTGGTGACGAGTGCGATGTCACAGGGCAGCAGCGATCGGCGCGAGTGCAATACTCCTGCGATGAGCATCTGAGGGAGCCGCAGCTGCTCAGCATCATTGAGCTGTCCACCTGTCAGTACCTGGTGAAGTTTGCGCTGCCGGAGCTGTGTCGGCACCCTGGCTTCAGCCTGCAGGCACCTGTTGCGCATGTGCATTGCACGCTGCATTCAGATGTCAGCACTGAAGACATGAGCAGCTGCGATGCAGCAAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_456937.p1 GENE.S_Transcript_456937~~S_Transcript_456937.p1 ORF type:5prime_partial len:85 (+),score=5.88 S_Transcript_456937:3-257(+)
GGDECDVTGQQRSARVQYSCDEHLREPQLLSIIELSTCQYLVKFALPELCRHPGFSLQAPVAHVHCTLHSDVSTEDMSSCDAAR*

Click here to download the sequence:
Link to NCBI Protein BLAST