Transcript Information: S_Transcript_45741.p1


Annotated TAIR IDAT1G56460.2
Annotated Gene NameHIT zinc finger ;PAPA-1-like conserved region
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:21146765-21149468 | Forward length=532
E-Value9.6E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.1664271154687
Replicate 24.0358761385698
Replicate 34.048405481766
Condition 2: 8 Hour
Replicate 15.4613804470706
Replicate 25.1837210262781
Replicate 34.1591897765817
Condition 3: 24 Hour
Replicate 13.4632132363137
Replicate 23.0402674065832
Replicate 37.0744758697277


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_45741.p1 GENE.S_Transcript_45741~~S_Transcript_45741.p1 ORF type:5prime_partial len:82 (+),score=8.63,zf-HIT|PF04438.12|7.2e-08 S_Transcript_45741:2-247(+)
GGACCAAATACAGTTAGATGGATTATGGGTGAATATGGGACGGTTGTTACTTTCTCTGACGATATAGGGCTACCAAAGATTTTTGACTCCCAACCATACAGGTATCCTCCACCAAGGGAGAAATGTGCTGGGCCAAATTGTACGAATGACTACAAATACCGTGATTCTAAATCAAGACTCCCACTGTGCAGTCTCAATTGCTACAAAGCTGTGCAAGGAAATATGGAACTTTTCCCTGCCTGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_45741.p1 GENE.S_Transcript_45741~~S_Transcript_45741.p1 ORF type:5prime_partial len:82 (+),score=8.63,zf-HIT|PF04438.12|7.2e-08 S_Transcript_45741:2-247(+)
GPNTVRWIMGEYGTVVTFSDDIGLPKIFDSQPYRYPPPREKCAGPNCTNDYKYRDSKSRLPLCSLNCYKAVQGNMELFPAC*

Click here to download the sequence:
Link to NCBI Protein BLAST