Transcript Information: S_Transcript_457671.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value5E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.018679473117
Replicate 20
Replicate 30.35297102552346
Condition 2: 8 Hour
Replicate 10.20407072073811
Replicate 21.2845080558695
Replicate 30.20397940291848
Condition 3: 24 Hour
Replicate 10.41808389455683
Replicate 20.43375715935593
Replicate 30.36203891490597


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_457671.p1 GENE.S_Transcript_457671~~S_Transcript_457671.p1 ORF type:complete len:209 (-),score=35.50,zf-RVT|PF13966.2|1.1e-14 S_Transcript_457671:1-627(-)
ATGGCTGTAAAGCTCAAGAAGGATGCCCTATGGATAAAGTTGATTCACTCATATTTCATCAAGAATAAAGATGTGTCAGGAATGGCCATTCCTATTTCCCTCTCGTGGATGCTGAGGAAGATTTTGGAGTGCAGAAACATTGTTGAGGAGATGCAAGATGAAATCAGACACGATTGGAGCACTAAGAAGTTATATGTGCAGATGAGAGGGGAGAACCTTAAGGTCCCTTGGCGCAATATCATATGTCAAAATCCTGCCAGGCCTAAGGCTGTACTCTCTCTATGGCTTTTCTTGCTACAGAGACACCTTACTACTGACAGACTGGAAAAATGGGGATGGACTGGAGACAGGAAATGCTGGCTATATAGAAGGGAGCTGGAAGACCACACTCACCTCATGTTCAACTGCCCATACACTCTGGAAATCTGGAAAAATACTCTCAATGGATTCAGAAGAGGTCAAGCTGATGAAGTACAACCTAGAACCTGGCAGGAGGGGATGCTGTGGCTAATTGGTAATTGCAGAGGCAAAGGAGGGAAAAAGGTGCTGTTTAAAATGATTAGTGCAGAGATATGGTTCACTGTGTGGTGTGAGAGGAATAAGAGAATTTTTGAGCATATAGAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_457671.p1 GENE.S_Transcript_457671~~S_Transcript_457671.p1 ORF type:complete len:209 (-),score=35.50,zf-RVT|PF13966.2|1.1e-14 S_Transcript_457671:1-627(-)
MAVKLKKDALWIKLIHSYFIKNKDVSGMAIPISLSWMLRKILECRNIVEEMQDEIRHDWSTKKLYVQMRGENLKVPWRNIICQNPARPKAVLSLWLFLLQRHLTTDRLEKWGWTGDRKCWLYRRELEDHTHLMFNCPYTLEIWKNTLNGFRRGQADEVQPRTWQEGMLWLIGNCRGKGGKKVLFKMISAEIWFTVWCERNKRIFEHIE*

Click here to download the sequence:
Link to NCBI Protein BLAST