Transcript Information: S_Transcript_457780.p1


Annotated TAIR IDAT5G48930.1
Annotated Gene Namehydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase
Annotated Gene Symbol(s)HCT
Annotation TypeHomolog
Chromosome Positionchr5:19836654-19838092 | Reverse length=433
E-Value1E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4471725273729
Replicate 22.7895481049731
Replicate 31.2719128333518
Condition 2: 8 Hour
Replicate 11.0621841920411
Replicate 21.2000225323991
Replicate 31.3067186271253
Condition 3: 24 Hour
Replicate 12.5109061483442
Replicate 22.3445322320359
Replicate 35.7015349421527


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_457780.p1 GENE.S_Transcript_457780~~S_Transcript_457780.p1 ORF type:complete len:261 (+),score=37.39,Transferase|PF02458.11|6e-52 S_Transcript_457780:149-931(+)
ATGAAAGTGGTGAAGCAAACAAGAATGGTGAGGCCAAGTGAGGAGACCCCAAGGCACCGTCTTTGGCTATCAAGCCTAGACTTGTTTTCTAGCATTCCCAATACACACAGTCCGCTTGTGCTCTTCTTTCGTTGTCCAAATAGTCATGGTCAAAATCCTTTCAGTGCTGAAATTATGAAGGAAGCTTTGAGCAGAGCTCTGGTTCCATTCTATCCTTTGGCAGGAAGGTTAAATAGAAATCATGACAAAAATGGCAGGCTAGAGATCGATTGCAATGGGGAAGGGATCTTTTTTATCGAGGCCACGACTTCACAATTCACGCTTTCCGATTTTGAGAAGGATGAGTTTAGGCCCAGTGAAGAGCTATACGAGCTTGTAATCCCCAAATGGGATTATTCGGGTAGTAATTGGAATGAGATGATCTCAAACTTGCCATTTTTGTTAATACAAATGACCCAATTTAGCTGTGGTGGTGTAGCACTTGGAATTGCCTTACAACACCAAATAGGAGATGCTGCTGCCATTGTTTACTTCATTGAATCATGGTCTAGACTTGCTAGGGGACTTGGTCTTGCTTTTCCTCCCGTCTTTGATCGGGTTTCCTACTTTGCTCCTCGGAATCCTCGCAGAGTTGAGTTCTACCACTTGGAGTACCAAGATCCACCTTTGCCCCTCCCTGTCCCCGGTTACTCGCGACTCGACACAGCCACCACAAAGGTGTCGCTTTGCAAATTTTCCAAGAATCAAATAAGTGCATTAAAACAACAGGCAATGTCATTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_457780.p1 GENE.S_Transcript_457780~~S_Transcript_457780.p1 ORF type:complete len:261 (+),score=37.39,Transferase|PF02458.11|6e-52 S_Transcript_457780:149-931(+)
MKVVKQTRMVRPSEETPRHRLWLSSLDLFSSIPNTHSPLVLFFRCPNSHGQNPFSAEIMKEALSRALVPFYPLAGRLNRNHDKNGRLEIDCNGEGIFFIEATTSQFTLSDFEKDEFRPSEELYELVIPKWDYSGSNWNEMISNLPFLLIQMTQFSCGGVALGIALQHQIGDAAAIVYFIESWSRLARGLGLAFPPVFDRVSYFAPRNPRRVEFYHLEYQDPPLPLPVPGYSRLDTATTKVSLCKFSKNQISALKQQAMSF*

Click here to download the sequence:
Link to NCBI Protein BLAST