Transcript Information: S_Transcript_45814.p1


Annotated TAIR IDAT3G22430.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380); BEST Arabidopsis thaliana protein match is: XS domain-containing protein / XS zinc finger domain-containing protein-related (TAIR:AT5G23570.1); Has 565 Blast hits to 510 proteins in 121 species: Archae - 2; Bacteria - 90; Metazoa - 191; Fungi - 32; Plants - 51; Viruses - 4; Other Eukaryotes - 195 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:7953455-7957605 | Forward length=510
E-Value4E-149
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 130.612643039312
Replicate 228.56684890684
Replicate 329.245417720238
Condition 2: 8 Hour
Replicate 129.214552052951
Replicate 228.535961078033
Replicate 328.626485126536
Condition 3: 24 Hour
Replicate 129.000240317956
Replicate 224.759886635431
Replicate 325.756615673818


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_45814.p1 GENE.S_Transcript_45814~~S_Transcript_45814.p1 ORF type:complete len:519 (+),score=109.02,XS|PF03468.10|1.1e+04,XS|PF03468.10|6.2e-27 S_Transcript_45814:227-1783(+)
ATGGCCGGCGACAACCCCAAACCTTCCTCCTCCAACAAACGCCCTCCTTCCTCCTCTTCTTCCGACCGTAAATCCCGTTGGGAAACCTCCAAACCCACCGCCGCTTCCGTCAGCGACCCCAAAGCCCCCACCCAATCCTCCTCCAATAAACCCATCCCCAAACGTGGTACTAACCCTAACCCTAGCCCAGCCCACCCTAATCCAAGCCCAGCTAGAGCACCCGGCCCACATCCCCCTTTCCCATTCCCTGACCCGGGCCCACCACCTCCCCCAAGCTATGGCTTCCACATGCTTGACCGCCGTACAATAGTCCTCGCCGATGGTAGTGTCCGATCATACTTCGCCTTACCCCCTGACTACCAAGATTTCAATCCACCTCCCCCAAGACCCCCACTTGGGCCGCCGATGGGCCGGCTCATGCCCCCACTTGGTCCGATGAGTCCGGAGGGGTTCCGGGACCGGGAACGTGGCCAGGACTACTGGAAGTCACTTGAACAAGATGGGCGTGGCGGGCTGGAGGGGTCCACGAAGAGGAAGTTTGGAGAAGGGGAGGAGAGAGAAAGAGAAAGAGAAGAGTTTGCAAGGCAAAGACAACATCTGTTACAGTATGGGAATGTCGGGGCGAGTTTAGGGACCGGTACGAGTAGTCCCTTTGGTAGGGATGATGAGTTTCGATCTTCCAAGTATATGCGAATTGGTGGTGGTGGTGTCGGACCTGGTGGAGGGTTTGAGAATAATTTGGGTATGATGATGATGATGAGGCAGGAAGTTGATCCTGCTGTATTGAAGGCTTGTTTGAAGTTTGTTAAATTGATTAATGAGAATAGTAATCAGAAGAAGAATCTCGAGAATGGGAAATCTATTCAGTGCCTCGCTTGTGACAGGTCCTCAAAAGATTTCCAAGATGTACATGCCCTTATAATGCATGCTTACAACTCAGATAATGCTGATTTGCGTGTGGATCACCTGGGCTTCCACAGAGCGCTTTGTGTCATAATGGGGTGGAATTACTTGAGGCCTCCTGATAACTCCAGGGCTTATCAGTTTGTGCCTGCTGATGAAGCGGCTGCAAACCAGGATGATTTGATCTTGTGGCCGCCTATGGTGATCATTCATAACACAAATACCGGCAAGGGTAAAGATGGGCGCATGGAGGGTTTGGGAAATAAGACAATGGATAATAAACTTAGAGATCTTGGAATATTGGGAGGCAAGTCAAAATCATTGTACAGTAGGGAAGGCCACCTTGGCATTACCCTTATTAAGTTTGCTAGTGATCAGTCAGGCCTGAAGGAGGCCATGCGATTAGCTGACCATTTTGAGAGGGATTGCCATGGGCGTAGAGCTTGGGCCCATGTGCAATCTACAGCTAGTGGCAAGGATGATGAAAGTAATCCAAATCTCGTGATGGTGGATGAGAGAACGGGGGATAAGAGGAGAGTTCTCTATGGCTATCTTGGGACAGCCTTTGACCTGGACAAACTGGATTATGACTCTCGAAAGAAGGTTGTCATAGAGAGCAAGTATGAAAAACTACAGCCACCTAAACCCACATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_45814.p1 GENE.S_Transcript_45814~~S_Transcript_45814.p1 ORF type:complete len:519 (+),score=109.02,XS|PF03468.10|1.1e+04,XS|PF03468.10|6.2e-27 S_Transcript_45814:227-1783(+)
MAGDNPKPSSSNKRPPSSSSSDRKSRWETSKPTAASVSDPKAPTQSSSNKPIPKRGTNPNPSPAHPNPSPARAPGPHPPFPFPDPGPPPPPSYGFHMLDRRTIVLADGSVRSYFALPPDYQDFNPPPPRPPLGPPMGRLMPPLGPMSPEGFRDRERGQDYWKSLEQDGRGGLEGSTKRKFGEGEEREREREEFARQRQHLLQYGNVGASLGTGTSSPFGRDDEFRSSKYMRIGGGGVGPGGGFENNLGMMMMMRQEVDPAVLKACLKFVKLINENSNQKKNLENGKSIQCLACDRSSKDFQDVHALIMHAYNSDNADLRVDHLGFHRALCVIMGWNYLRPPDNSRAYQFVPADEAAANQDDLILWPPMVIIHNTNTGKGKDGRMEGLGNKTMDNKLRDLGILGGKSKSLYSREGHLGITLIKFASDQSGLKEAMRLADHFERDCHGRRAWAHVQSTASGKDDESNPNLVMVDERTGDKRRVLYGYLGTAFDLDKLDYDSRKKVVIESKYEKLQPPKPT*

Click here to download the sequence:
Link to NCBI Protein BLAST