Transcript Information: S_Transcript_458186.p1


Annotated TAIR IDAT2G47560.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:19511934-19512617 | Reverse length=227
E-Value2E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.092086509464292
Replicate 20.15268366475789
Replicate 30
Condition 2: 8 Hour
Replicate 10.14758055582791
Replicate 20.077411240967912
Replicate 30.14751451629745
Condition 3: 24 Hour
Replicate 10.22676349644215
Replicate 20.31368597337505
Replicate 30.087273510052305


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_458186.p1 GENE.S_Transcript_458186~~S_Transcript_458186.p1 ORF type:3prime_partial len:289 (+),score=32.05,zf-RING_2|PF13639.2|2.1e-13,zf-RING_2|PF13639.2|6.1e+03,zf-RING_11|PF17123.1|1e-08,zf-RING_11|PF17123.1|5.8e+02,zf-rbx1|PF12678.3|1.3e-05 S_Transcript_458186:261-1124(+)
ATGGAGGATATAACATCTTCATCAAAAACAAAGGGCCCTTATATTACAATATTAGTGATTGCAATTGGTGCCTTAGTCTCAACTTCAGTTGTGCTTGCACTTCTTCACATAATGTTTGTCAAGTTTTGCAAGCGAAGGCGTCCGAGCATGGAGACCCTTCTTATTGAGCCTTCCACTATAGGTCTTGATAAACGCATCCTCAACACTATTCCAATCTTGTTTTATTCCTCAAAAACTTGTGAACTACATGGTATTAACCAAGGTGATCAATGTGTCATTTGTCTTGGTCATTTACACAAAGGGGATTCAATAAGATGGCTCCCTATTTGTGGTCATGTTTTTCATGTCCCTTGTGTTGATAATTGGTTCAATTTGCATTCCAATTGCCCCATTTGTCGATCCCCGGTTAGTCTTGTCCCCTTAATGGCTAAGAAAACCACCCCCAATCGGAACCTATTGATTCCGATTTGCAACCAAGATACTGGTGCTAGTGATCGTAACAATGATAATGATGATGCTCGAAGATGCATTTCGAGAACAAGATCAGGGAGTTTACTGTGTCATTGTAATAGAATGGTTTTCCCAGTTGATGGATTAAGGCCAAGGGATTTGATCAAAGCTGGTTTACAAAGGTCACTCTCTATGGATCAATCTAGTGTAGTAGTTGATATTACAGATGAGCAAAATACAGAGAGAGCTTCATCTCCTAATTACTCATCTTATAATTCTTACCCTCCTTTGTCCAAAATTGATTTTGTATTGAGTAGATTATATCAAGGTCCATCTATTAGGCATCTTGAAAATATGTATAGCATGGCTCCTAGGTGGTTGCATGGGCTTAGGTCAGGACCAGGTGGTGATATG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_458186.p1 GENE.S_Transcript_458186~~S_Transcript_458186.p1 ORF type:3prime_partial len:289 (+),score=32.05,zf-RING_2|PF13639.2|2.1e-13,zf-RING_2|PF13639.2|6.1e+03,zf-RING_11|PF17123.1|1e-08,zf-RING_11|PF17123.1|5.8e+02,zf-rbx1|PF12678.3|1.3e-05 S_Transcript_458186:261-1124(+)
MEDITSSSKTKGPYITILVIAIGALVSTSVVLALLHIMFVKFCKRRRPSMETLLIEPSTIGLDKRILNTIPILFYSSKTCELHGINQGDQCVICLGHLHKGDSIRWLPICGHVFHVPCVDNWFNLHSNCPICRSPVSLVPLMAKKTTPNRNLLIPICNQDTGASDRNNDNDDARRCISRTRSGSLLCHCNRMVFPVDGLRPRDLIKAGLQRSLSMDQSSVVVDITDEQNTERASSPNYSSYNSYPPLSKIDFVLSRLYQGPSIRHLENMYSMAPRWLHGLRSGPGGDM

Click here to download the sequence:
Link to NCBI Protein BLAST