Transcript Information: S_Transcript_458223.p1


Annotated TAIR IDAT5G38420.1
Annotated Gene NameRibulose bisphosphate carboxylase (small chain) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:15381203-15381978 | Reverse length=181
E-Value4.8E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.5622287831738
Replicate 24.412557911503
Replicate 36.8501591167659
Condition 2: 8 Hour
Replicate 16.7022655282418
Replicate 26.6050219793479
Replicate 36.699266390137
Condition 3: 24 Hour
Replicate 13.9528836792504
Replicate 26.043683087026
Replicate 36.2454586146002


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_458223.p1 GENE.S_Transcript_458223~~S_Transcript_458223.p1 ORF type:5prime_partial len:105 (+),score=8.30,RuBisCO_small|PF00101.16|5.3e-32 S_Transcript_458223:1-315(+)
CCTCTATCAGAGGAGTCTCTGTTGAAGGAGGTTCAGTACCTTCTTAACCAGGGATGGGTTCCTTGCTTGGAATTCGCGCCCCTCCACGGATTTGTGTACCGTGCGAACCACAGGTCACCAGGATACTACGATGGACGCTGCTGGACAATGTGGAAGCTACCCATGTTTGGCTGCACTGACCCTACCCCAGTCATCAAGGAGCTCGAGGAGGCTAAGAAGGCTTACCCACCAGCCTTCATCCGTATCATTGGATTCGACAATGTCCCTCAAGTGCAGTGCATCAGTTTCATTGTCTACAAGCCCGAAGGCTACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_458223.p1 GENE.S_Transcript_458223~~S_Transcript_458223.p1 ORF type:5prime_partial len:105 (+),score=8.30,RuBisCO_small|PF00101.16|5.3e-32 S_Transcript_458223:1-315(+)
PLSEESLLKEVQYLLNQGWVPCLEFAPLHGFVYRANHRSPGYYDGRCWTMWKLPMFGCTDPTPVIKELEEAKKAYPPAFIRIIGFDNVPQVQCISFIVYKPEGY*

Click here to download the sequence:
Link to NCBI Protein BLAST