Transcript Information: S_Transcript_45870.p1


Annotated TAIR IDATCG01280.1
Annotated Gene NameChloroplast Ycf2;ATPase, AAA type, core
Annotated Gene Symbol(s)YCF2.2
Annotation TypeOrtholog
Chromosome PositionchrC:145291-152175 | Reverse length=2294
E-Value2.1E-76
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0987741164251
Replicate 23.1734149363549
Replicate 31.8948016524247
Condition 2: 8 Hour
Replicate 10.73032158620318
Replicate 21.9920139199757
Replicate 32.627981211573
Condition 3: 24 Hour
Replicate 11.7954698759393
Replicate 21.2418526891149
Replicate 31.2092761016152


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_45870.p1 GENE.S_Transcript_45870~~S_Transcript_45870.p1 ORF type:complete len:146 (+),score=15.15,DUF825|PF05695.8|5e-80 S_Transcript_45870:101-538(+)
ATGGACACATCTAAGATTTTGAGTAAGTGTTTACATAATCTTCTTATGTCTGAAGAAATGATTCATCGAAATAATGAGTCACCGTTGATATGGACACATCTGGGATCGCCAAATGCTCGGGATTTCTTCTATTCAATCCTTTTCCTTCTTCTTGTTGCTGGATATCTCGTTCATACACATCTTCTCTTTGTTTTCCGAGCCTCTAGTGAGTTACAGACAGAGTTCGAAAAGGTCAAATCTTTGATGATTCCATCATACATGATTGAGTTGCGAAAACTTCTGGATAGGTATCCTACATCGGAACCGAATTCCTTCTGGTTAAAGAATCTCTTTCTGGTTGCTCTAGAACAATTAGGAGATTCCCTAAAAGAACTACGGGTTTCTGCTTCTGGCGGCAACATGCTATTGGATGGTGGTCCCGCTTATGGGGTCAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_45870.p1 GENE.S_Transcript_45870~~S_Transcript_45870.p1 ORF type:complete len:146 (+),score=15.15,DUF825|PF05695.8|5e-80 S_Transcript_45870:101-538(+)
MDTSKILSKCLHNLLMSEEMIHRNNESPLIWTHLGSPNARDFFYSILFLLLVAGYLVHTHLLFVFRASSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSEPNSFWLKNLFLVALEQLGDSLKELRVSASGGNMLLDGGPAYGVK*

Click here to download the sequence:
Link to NCBI Protein BLAST