Transcript Information: S_Transcript_45871.p1


Annotated TAIR IDATCG01280.1
Annotated Gene NameChloroplast Ycf2;ATPase, AAA type, core
Annotated Gene Symbol(s)YCF2.2
Annotation TypeOrtholog
Chromosome PositionchrC:145291-152175 | Reverse length=2294
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3257399139296
Replicate 20.73271256833075
Replicate 32.0416313007676
Condition 2: 8 Hour
Replicate 10.98364346481241
Replicate 21.6510589402012
Replicate 33.1855787011134
Condition 3: 24 Hour
Replicate 11.0479095401392
Replicate 20.54359695662826
Replicate 31.6287298047584


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_45871.p1 GENE.S_Transcript_45871~~S_Transcript_45871.p1 ORF type:complete len:542 (+),score=12.78,AAA|PF00004.25|5e-09 S_Transcript_45871:1286-2911(+)
ATGATTGAACAACCGGGAGCAATTTACTTACGATATTTAGTTGACATTCATAAAAAGTATCTAATGAATTATGAGTTCAATACATCTTGTTTAGCAGAAAGACGGGTATTCCTTGCTCATTATCAGACAATCACTTATTCACAAACTTCGTGTGGGGCTAATAGTTTTCATTTCCCATCTCATGGAAAACCCTTTTCGCTCCGCTTAGCCCTATCCCCCTCTAGAGGTATTTTAGTGATAGGTTCTATAGGAACTGGACGATCCTATTTGGTCAAATACCTAGCGACAAACTCCTATGTTCCTTTTATTACGGTATTTCTGAACAAGTTCTTGGATAACAAGCCTAAAGGTTTTCGTATTGATGATAGTGACGATATTGATGCTAATGACGATATTGATACTAGTGACGATATTGATGCTAGTGACGATATCGATCGTGACCTTGATACGGAACTGGAGCTGCTAACTATGATGGATGCGCTAACTATGGATATAATGCCGGAAATAGACCAATTTTATATCACCCTTCAAGTCGAATTAGCAAAAGCAATGTCTCCTTGCATAATATGGATTCCAAACATTCATGATCTGGATGTGAATAAGTCGAATTACTTATCCCTCGGTCTATTAGTGAACTATCTCTCCAGGGATTGTGAAAGATGGTCCACTAGAAATATTCTTGTTATTGCTTCGACTCATATTCCTCAAAAAGTGGATCCCGCTCTAATAGCTCCGAATAAATTAAATACATGCATTAAGATACGAAGGCTTCTTATTCCACAACAACGAAAGCACTTTTTCACTCTTTCATATACTAGGGGATTTCACTTGGAAAAGAAAATGTTCCATACTAATGGATTCGGGTCCATAACCATGGGTTCCAATGTACGAGATCTTGTAGCACTTACCAACGAGGCCCTATCGATTAGTATTACACAGAAGAAATCAATTATAGACACTAATACAATTAGATCCGCTCTTCATAGACAAACTTGGGATTTGCGATCCCAGGTAAGATCGGTTCAGGATCATGGGATCCTTTTCTATCAGATAGGAAGGGCTGTTGCACAAAATGTACTTCTAAGTAATTGCCCTATAGATCCTATATCTATCTATATGAAGAAGAAATCATGTAACGAAGGGGATTCTTATTTGTACAAATGGTACTTCGAACTTGGAACGAGCATGAAGAAATTAACGATACTTCTTTATCTTTTGAGTTGTTCTGCCGGATCGGTCGCTCAAGATCTTTGGTCTCTACCCGGACCCGATGAAAAAAATGGGATCACTTCTTATGGACTCGTTGAGAATGATTCTGATCTAGTTCATGGCCTATTAGAAATAGAAGGCGCTCTGGTGGGATCCTCACGGACAGAAAAAGATTGCAGTCAGTTTGATAATGATCGAGTGACATTGCTTCTTCGGCCCGAACTAAGGAATCCCTTAGATATGATGCAAAATGGATCTTGTTCTATCCTTGATCATAGATTTCTCTATGAAAAATACGAATCGGAATTGGAAGAAGGGGAAGGAGCCCTCGACCCGCAACAGATAGAGGAAGATTTATTCAATCACATAGTTTGGGCTCCTAGGATATGGGACCCCTGGGGCTTTCTATTTGAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_45871.p1 GENE.S_Transcript_45871~~S_Transcript_45871.p1 ORF type:complete len:542 (+),score=12.78,AAA|PF00004.25|5e-09 S_Transcript_45871:1286-2911(+)
MIEQPGAIYLRYLVDIHKKYLMNYEFNTSCLAERRVFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFLDNKPKGFRIDDSDDIDANDDIDTSDDIDASDDIDRDLDTELELLTMMDALTMDIMPEIDQFYITLQVELAKAMSPCIIWIPNIHDLDVNKSNYLSLGLLVNYLSRDCERWSTRNILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALSISITQKKSIIDTNTIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCPIDPISIYMKKKSCNEGDSYLYKWYFELGTSMKKLTILLYLLSCSAGSVAQDLWSLPGPDEKNGITSYGLVENDSDLVHGLLEIEGALVGSSRTEKDCSQFDNDRVTLLLRPELRNPLDMMQNGSCSILDHRFLYEKYESELEEGEGALDPQQIEEDLFNHIVWAPRIWDPWGFLFE*

Click here to download the sequence:
Link to NCBI Protein BLAST