Transcript Information: S_Transcript_458719.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value7E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.38851096693694
Replicate 20
Replicate 30.13461851155913
Condition 2: 8 Hour
Replicate 10.15565978333674
Replicate 20.16329816525348
Replicate 30.15559012850351
Condition 3: 24 Hour
Replicate 10.47835511293272
Replicate 20.33085856315836
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_458719.p1 GENE.S_Transcript_458719~~S_Transcript_458719.p1 ORF type:internal len:137 (+),score=12.24,zf-RVT|PF13966.2|2.4e-06,zf-RVT|PF13966.2|4.2e+03 S_Transcript_458719:3-410(+)
ACTCTTGATATTTTGCAGCGACGGTATCCAAACTGGTGCCTTTCTCCTGGAGTTTGTGTTATGTGTCGAAGGGCGAATGAGACTAACTCTCATCTCTTTTTGACGTGTGATGTGGCACAAAATTTATGGCGTCGGCTTTTTGGGATGAGAAATGAGCCTTGGGTTTGTCCACCAACTGTTTCTCATCTTTTATTGGGTCGATATGGAGGTTTTGGGAGCGGAAAGGATCGACGCTTGTTGTGGCGCGACGCAATGATAGCTGTGTTCTGGAGTATTTGGCTGGAGAGGAATGCGAGGATGTTCCATGGGGTGGTAACTCCCCCTGACAATGTTTGGGATAGGGTGGTGTATCGGGCCTCTTTATGGGCCCGGGCCTTTGGAGCTTTCCGCGATATCCCCTTGGCTGCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_458719.p1 GENE.S_Transcript_458719~~S_Transcript_458719.p1 ORF type:internal len:137 (+),score=12.24,zf-RVT|PF13966.2|2.4e-06,zf-RVT|PF13966.2|4.2e+03 S_Transcript_458719:3-410(+)
TLDILQRRYPNWCLSPGVCVMCRRANETNSHLFLTCDVAQNLWRRLFGMRNEPWVCPPTVSHLLLGRYGGFGSGKDRRLLWRDAMIAVFWSIWLERNARMFHGVVTPPDNVWDRVVYRASLWARAFGAFRDIPLAA

Click here to download the sequence:
Link to NCBI Protein BLAST