Transcript Information: S_Transcript_458915.p1


Annotated TAIR IDAT4G19670.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:10699383-10701342 | Reverse length=532
E-Value3E-69
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5164325956395
Replicate 22.6501849318336
Replicate 34.043002204513
Condition 2: 8 Hour
Replicate 13.3941311916158
Replicate 25.2402528345306
Replicate 35.504993675761
Condition 3: 24 Hour
Replicate 14.0016152940728
Replicate 24.2877481360657
Replicate 35.529156881602


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_458915.p1 GENE.S_Transcript_458915~~S_Transcript_458915.p1 ORF type:complete len:333 (-),score=74.53,RVT_3|PF13456.2|1.4e-05 S_Transcript_458915:103-1041(-)
ATGGAAGATCAGACAATACGTTTGGTTGAAGGATCTTGTAATAATAATTCAGTTGGTGAACAGTTGAAAGTGGAAGAAGATGAGGAAGAATTCAGGAGCTGTTGTGGTGAGGACATTGAGTGGAAAGAGAGAGAAGAATCTGTGAAAGAAGAAGAAGAACATGATGATAATGATGAGGGTTTATGTGATGATGAATCGATGGTGAAGATGTATTTTAAGGGCATTTCAGTTGATGGGTTTGGGGAATCGGGTTCTGGGTTATCTGGGATCGGGGTTGTTATCCAAGGGTTTGGTGATTTGGGTTTTGTTTGTGTTCAGAAAAGGCTGGACTTTTATGTGAGGGATTTAGTTGCTGAGTATTTGGCCTTGTTGGATGGTTTGGCTGAAGCTTTGAAATCAAAATATATTAGGCGAGTTATTGCTTATACTGATTCTGCAGTTTTGTACGAGCAGATCACGCATGAGGAGAGCCTTTGTAATCCTCTAATGACAGCCTTGAGGGAGAGGGTTATTGAACTTGCTGGTACACTAGAAGCTTTTAATTTGAAAGTTGTTCCGAGTATTCATGTAAGAAGGCCGTTAGAACTGGCTCAGGTATCGATTGGTTTGGTTGCTTTAGATGTGAAGAATGATGGTTTACTTGAAAGTTGTTCAATATGTTGCGAGGATAAACCATCAGTAATGATGGTCAGTTTGAGATGCTCACACAAGTTTTGCTCTCATTGTATGAAGACTTATGCTGATGGGAAACTAAAGGCCAGTCAAGTACCGATTAGATGCCCTCAGCTGAGATGCAACTACCTCATCTCGATTTCTGAGTGCAAAATGTTTCTTCCTGTTATTTCCTTCGAAGTCCTAGAGAGAGCAATAGCAGAATCCAATGTCTTTACGTCAGAAAAAAATTTACTGCCCATATCAGAACTGTTCAACTCTGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_458915.p1 GENE.S_Transcript_458915~~S_Transcript_458915.p1 ORF type:complete len:333 (-),score=74.53,RVT_3|PF13456.2|1.4e-05 S_Transcript_458915:103-1041(-)
MEDQTIRLVEGSCNNNSVGEQLKVEEDEEEFRSCCGEDIEWKEREESVKEEEEHDDNDEGLCDDESMVKMYFKGISVDGFGESGSGLSGIGVVIQGFGDLGFVCVQKRLDFYVRDLVAEYLALLDGLAEALKSKYIRRVIAYTDSAVLYEQITHEESLCNPLMTALRERVIELAGTLEAFNLKVVPSIHVRRPLELAQVSIGLVALDVKNDGLLESCSICCEDKPSVMMVSLRCSHKFCSHCMKTYADGKLKASQVPIRCPQLRCNYLISISECKMFLPVISFEVLERAIAESNVFTSEKNLLPISELFNSA*

Click here to download the sequence:
Link to NCBI Protein BLAST