Transcript Information: S_Transcript_459280.p1


Annotated TAIR IDAT5G62910.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:25250830-25252015 | Forward length=327
E-Value3E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4516182491917
Replicate 22.2062789557515
Replicate 31.5089511341128
Condition 2: 8 Hour
Replicate 12.5202734011157
Replicate 20.40676088435867
Replicate 30.58134129831767
Condition 3: 24 Hour
Replicate 10.59576954974348
Replicate 20.82413860277627
Replicate 30.91716525109513


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_459280.p1 GENE.S_Transcript_459280~~S_Transcript_459280.p1 ORF type:5prime_partial len:110 (+),score=14.92,zf-RING_4|PF14570.2|1.1e-18,zf-C3HC4_3|PF13920.2|1e-06 S_Transcript_459280:3-332(+)
AAGCATCATCATCATCATTATCAAATCCAGGATCCAGACCGTTGCATTTCTCAAGGGCCTGGAGTATTGTCATGGCAAAGAGTTGTCTCACAGCAACCTTCCATATGTCCAATTTGCTGTGAAGATTTTGATGTAACAGACTCGAGCTTCCTCCCATGCCCCTGTGGCTTCCGACTTTGTCTTTTCTGTCACAAAAGGATTTTAGAGGTTGATGGGCGTTGTCCTGGCTGCAGAAAGCAGTATGAATCTGTAAATTCAGGAGGCGGATTTGATGGAAGACCTGTTGCATTGCAGTTGACTCATTCGTGCAGCCAAATTGTGAGGTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_459280.p1 GENE.S_Transcript_459280~~S_Transcript_459280.p1 ORF type:5prime_partial len:110 (+),score=14.92,zf-RING_4|PF14570.2|1.1e-18,zf-C3HC4_3|PF13920.2|1e-06 S_Transcript_459280:3-332(+)
KHHHHHYQIQDPDRCISQGPGVLSWQRVVSQQPSICPICCEDFDVTDSSFLPCPCGFRLCLFCHKRILEVDGRCPGCRKQYESVNSGGGFDGRPVALQLTHSCSQIVRF*

Click here to download the sequence:
Link to NCBI Protein BLAST