Transcript Information: S_Transcript_45947.p1


Annotated TAIR IDAT5G52820.1
Annotated Gene NameWD-40 repeat family protein / notchless protein, putative
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21401423-21404203 | Forward length=473
E-Value1.6E-300
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.729738264255
Replicate 217.242348141587
Replicate 319.411367180428
Condition 2: 8 Hour
Replicate 122.938234962967
Replicate 222.512847685775
Replicate 320.912816872954
Condition 3: 24 Hour
Replicate 118.770078461456
Replicate 214.664819255284
Replicate 317.00898372698


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_45947.p1 GENE.S_Transcript_45947~~S_Transcript_45947.p1 ORF type:complete len:476 (+),score=97.36,WD40|PF00400.28|2.8e-07,WD40|PF00400.28|4.9e-05,WD40|PF00400.28|0.0093,WD40|PF00400.28|1.1e-05,WD40|PF00400.28|0.29,WD40|PF00400.28|29,WD40|PF00400.28|2.5e-07,WD40|PF00400.28|4.6e-06,WD40|PF00400.28|6.6e-05,NLE|PF08154.8|1.5e-10,eIF2A|PF08662.7|0.0045,eIF2A|PF08662.7|2e+03,eIF2A|PF08662.7|4.1,eIF2A|PF08662.7|3.5,Ge1_WD40|PF16529.1|0.001,Ge1_WD40|PF16529.1|3.7e+02,Ge1_WD40|PF16529.1|0.44,Ge1_WD40|PF16529.1|4.2e+02,PD40|PF07676.8|8.8,PD40|PF07676.8|0.84,PD40|PF07676.8|11,PD40|PF07676.8|6e+02,PD40|PF07676.8|1.1e+02,DUF3312|PF11768.4|0.00057,DUF3312|PF11768.4|1.8 S_Transcript_45947:219-1646(+)
ATGGAAAATGACAACGACAACGGCAACGACAACAGGGTCATGTGTCAATTGACTGACCCAGAAGGGACGCCTCTTGGTACTACTATGTATCTTCCTCAAAATGTTGGCCCTAAAGAGCTTCTCCAAATTGTCAATAAACTTCTCAACAATGAAGAGAAGCTTCCTTATGCTTTCTATATATCTGACCATGAACTTGTTGTGGAGCTCGGAACTTATCTACAGAAGAATAAAGTTTCTGTGGAGAAGGCAGTTCAAATAGTTTATCAACCTCAGGCAATCTTTCGCATTCGTCCTGTTAACCGTTGTTCTGCTACAATAGCTGGTCATACAGAAGCTGTGCTTTCAGTCGCCTTTAGTCCTGATGGCCGACAATTGGCTAGTGGTTCAGGTGACACCACTGTTAGACTGTGGGATATATATACACAGACGCCATTGCACACCTGTACAGGGCACAAAAATTGGGTACTTTGCATTGCATGGTCCCCTGATGGTAAGCATCTAGTCAGTGGAAGTAAGGCAGGAGAACTACAGTGCTGGGATCCTCAAACAGGAAAGCCATCAGGCAATCCACTTGTGGGGCACAAAAAATGGATTACTGGCATATCTTGGGAACCAGTCCATCTCCAAGCTCCATGTCGCCGGTTTGTAAGTTCTAGCAAAGATGGTGATGCTCGTGTTTGGGATGTGGCCCTTAGAAAATGTGTTCTGTGCTTGAGTGGGCACATGCTTGCTGTAACTTGTGTGAAGTGGGGTGGAGAAGGATTGATATACACCGGCTCTCAGGATTGTACAATAAAAGTATGGGAAACAAAGCAAGGGAAATTGATTCGTGAATTGAAGGGCCATGGACATTGGGTCAATTCTTTAGCACTCAGTACTGAGTATGTACTTCGCACTGGAGCTTTTGACCACACGGGGAAACAGTATTCTTCTCCTGAGGAAATGAAGGAGGTTGCTCTGGCTAGATACAATCAAATGAGAGGCAATGCTCCGGAGAGACTGGTTTCAGGTTCCGATGATTTTACCATGTTTCTGTGGGAACCTGATGTAAGCAAGCATCCTAAAACCAGAATGACTGGTCACCAGCAGCTTGTAAATCATGTCTACTTTTCTCCTGATGGTCAATGGGTGGCAAGTGCTTCATTTGATAAATCAGTGAAGTTATGGAATGGTGTTACAGGAAAATTTGTTGCCGCCTTCCGAGGTCATGTTGGGCCTGTCTATCAGATAAGCTGGTCAGCAGATAGTAGGCTTTTGTTGAGTGGGAGCAAGGACTCAACACTCAAGATTTGGGATATCAGGACACAAAAGTTGAAACAAGATCTCCCAGGTCATGCAGATGAGGTTTTTGCTGTTGATTGGAGTCCCGACGGAGAAAAGGTGGCATCTGGTGGCAGGGATAGAGTATTGAAATTGTGGATGGGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_45947.p1 GENE.S_Transcript_45947~~S_Transcript_45947.p1 ORF type:complete len:476 (+),score=97.36,WD40|PF00400.28|2.8e-07,WD40|PF00400.28|4.9e-05,WD40|PF00400.28|0.0093,WD40|PF00400.28|1.1e-05,WD40|PF00400.28|0.29,WD40|PF00400.28|29,WD40|PF00400.28|2.5e-07,WD40|PF00400.28|4.6e-06,WD40|PF00400.28|6.6e-05,NLE|PF08154.8|1.5e-10,eIF2A|PF08662.7|0.0045,eIF2A|PF08662.7|2e+03,eIF2A|PF08662.7|4.1,eIF2A|PF08662.7|3.5,Ge1_WD40|PF16529.1|0.001,Ge1_WD40|PF16529.1|3.7e+02,Ge1_WD40|PF16529.1|0.44,Ge1_WD40|PF16529.1|4.2e+02,PD40|PF07676.8|8.8,PD40|PF07676.8|0.84,PD40|PF07676.8|11,PD40|PF07676.8|6e+02,PD40|PF07676.8|1.1e+02,DUF3312|PF11768.4|0.00057,DUF3312|PF11768.4|1.8 S_Transcript_45947:219-1646(+)
MENDNDNGNDNRVMCQLTDPEGTPLGTTMYLPQNVGPKELLQIVNKLLNNEEKLPYAFYISDHELVVELGTYLQKNKVSVEKAVQIVYQPQAIFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDIYTQTPLHTCTGHKNWVLCIAWSPDGKHLVSGSKAGELQCWDPQTGKPSGNPLVGHKKWITGISWEPVHLQAPCRRFVSSSKDGDARVWDVALRKCVLCLSGHMLAVTCVKWGGEGLIYTGSQDCTIKVWETKQGKLIRELKGHGHWVNSLALSTEYVLRTGAFDHTGKQYSSPEEMKEVALARYNQMRGNAPERLVSGSDDFTMFLWEPDVSKHPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSVKLWNGVTGKFVAAFRGHVGPVYQISWSADSRLLLSGSKDSTLKIWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGRDRVLKLWMG*

Click here to download the sequence:
Link to NCBI Protein BLAST