Transcript Information: S_Transcript_45951.p1


Annotated TAIR IDAT5G52820.1
Annotated Gene NameWD-40 repeat family protein / notchless protein, putative
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21401423-21404203 | Forward length=473
E-Value6.2E-84
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.703994777906
Replicate 20.94386265486694
Replicate 31.1834910855787
Condition 2: 8 Hour
Replicate 12.9650275307244
Replicate 20.23927110844627
Replicate 32.6217352669228
Condition 3: 24 Hour
Replicate 12.3363511754646
Replicate 20.84837797344616
Replicate 30.26975448561622


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_45951.p1 GENE.S_Transcript_45951~~S_Transcript_45951.p1 ORF type:complete len:187 (+),score=22.65,WD40|PF00400.28|0.001,WD40|PF00400.28|0.0023,WD40|PF00400.28|2.7e-06 S_Transcript_45951:325-885(+)
ATGTCAAGCTGTCAATCCGATTCCTGTTCTAGAAATATAGAGCTTTTGTATCTTTATGGATTTGTGCACATCGGGTATACAATTGCATTATGGTTCATTCGAATGAAAACCTTATCTGTAGTTTGTCTGAAGATACCTTTATTTTTGATCTCTTGCTATTTAGGGCACAAAAATTGGGTACTTTGCATTGCATGGTCCCCTGATGGTAAGCATCTAGTCAGTGGAAGTAAGGCAGGAGAACTACAGTGCTGGGATCCTCAAACAGGAAAGCCATCAGGCAATCCACTTGTGGGGCACAAAAAATGGATTACTGGCATATCTTGGGAACCAGTCCATCTCCAAGCTCCATGTCGCCGGTTTGTAAGTTCTAGCAAAGATGGTGATGCTCGTGTTTGGGATGTGGCCCTTAGAAAATGTGTTCTGTGCTTGAGTGGGCACATGCTTGCTGTAACTTGTGTGAAGTGGGGTGGAGAAGGATTGATATACACCGGCTCTCAGGATTGTACAATAAAAGTATGGGAAACAAAGCAAGGGAAATTGATTCGTGAATTGAAGAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_45951.p1 GENE.S_Transcript_45951~~S_Transcript_45951.p1 ORF type:complete len:187 (+),score=22.65,WD40|PF00400.28|0.001,WD40|PF00400.28|0.0023,WD40|PF00400.28|2.7e-06 S_Transcript_45951:325-885(+)
MSSCQSDSCSRNIELLYLYGFVHIGYTIALWFIRMKTLSVVCLKIPLFLISCYLGHKNWVLCIAWSPDGKHLVSGSKAGELQCWDPQTGKPSGNPLVGHKKWITGISWEPVHLQAPCRRFVSSSKDGDARVWDVALRKCVLCLSGHMLAVTCVKWGGEGLIYTGSQDCTIKVWETKQGKLIRELKK*

Click here to download the sequence:
Link to NCBI Protein BLAST