Transcript Information: S_Transcript_45956.p1


Annotated TAIR IDAT2G40700.1
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:16976783-16979392 | Forward length=609
E-Value3E-238
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2254774552067
Replicate 22.1524672739039
Replicate 33.5021920437499
Condition 2: 8 Hour
Replicate 14.0124427774397
Replicate 23.2739290692283
Replicate 33.8621047925402
Condition 3: 24 Hour
Replicate 13.9579579843585
Replicate 23.0797513988765
Replicate 34.3062027033125


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_45956.p1 GENE.S_Transcript_45956~~S_Transcript_45956.p1 ORF type:complete len:574 (+),score=98.82,DEAD|PF00270.25|1.5e-25,DEAD|PF00270.25|2.4e+03,Helicase_C|PF00271.27|1.1e+02,Helicase_C|PF00271.27|3.6e-23,DUF4217|PF13959.2|5.3e-17 S_Transcript_45956:1527-3248(+)
ATGGCTAATTTTTGTAAGCTTTCCATCACCACCAAATGTAAGAAATGGACTGAATATGCAGGTCCAGGGTTTTTAGATGATTTTTGGCCTATTTTTTTTAAAACATTTTTGGGTACTTGTGGTTTTCTTCATTCTACTAGCTGCTGGCATACTGCATCTGGTTTAGGATGCTACACATATGTACTTGTCATTACAACTATATTTGTCACTGATAGTTTCTTGGCAACAGCGCTGGTACTTGTACCGACGCGAGAATTATGCATGCAGGTTTATGAAATTCTACAGAAACTGCTGCATCGATTTCACTGGATTGTGCCAGGATATTTAATGGGTGGTGAAAATAGGTCAAAGGAAAAAGCAAGGCTACGCAAAGGCATATCTATACTTGTTGCAACTCCTGGTCGCCTGTTGGATCACTTAAAGAATACATCATCTTTCTTGTATACAAATTTGCGCTGGTTGATTTTTGACGAAGCAGATAGGATTCTAGAATTAGGATTTGGTAAAGAAATTCAGGAGATACTCGATATTCTTGGTTCATGCCAAAACAATATTGCTGGCCAAGAAAGTGGGACTGCCAGGATTTTTAAATTTCAAAGGCAGAACCTGCTCTTGTCGGCTACCTTAAATGAAAAGGTCAATCATCTTGCTAAAATTAGTTTAGAAAATCCAGTTATGATAGGTCTCAGTGGAAGGAAGCTCCAGCAAACCTCATTTCCTGAGCATTCTGGATCGATAGTATCAGAGGATGACGAAGAAGCTGCAGAACAGACTGGCAGAGTTATAAGTTCCTCGTCTGAGGATTATAACCTTCCATCTCAACTAGTTCAGAGATATGTCAAAGTGCCTTGTGGTTCGCGGCTGGCAGTGCTTGTATCAGTTCTGAAAAATCTTTTCGAAAGAGAAGCTACCCAAAAGGTTGTGGTCTTCTTCTCAACATGCGATGCTGTGGATTTCCACTACTCACTTCTTAAGGACTTCTCGTGGCCACCTAGTTCAGAGGCAGAAACAGAAAAGAGGCGACTATTTTTGAATAATAAAATTTTCCGCTTACATGGGAGCATGGAGCATGAGGAGCGAAGAACCACATTTCAAGCATTTAAAACAGATAAATCTGCTCTTCTCTTGTCTACTGATGTTTCTGCAAGAGGCTTGGACTTCCCTAAAGTCAGATGCATCATACAATATGATTCTCCTGGAGAGGCCACTGAATATGTTCATAGGGTTGGGAGAACAGCTCGCTTGGGCCAGAGGGGAGATTCGTTGTTATTTCTGCAACCCATCGAAATGGACTATTTGCAAGATTTGAAAAAACATGGTGTATCATTGACAGAATATCCACTGGAGAAAGTGTTGGATAGCTTTCCATTATATGGTCAGAAGCGCCTCCCAAAGAAGGTTCTTTCGATTGACATGCATCCCTGGGTAGTAGGTCTGCAGAAGGCTCTGGAAGCATTTATACTGGCCAAGGCAAATATAAAGAAAATGGCCCAGGCTGCATTTACATCATGGGTTCGGGCTTACACAGCCCATCGAGGTGAGCTAAAAAGGATCTTCATGGTGAAGAAACTCCATCTTGGTCATGTGGCCAAGAGTTTTGCTCTAAAAGAGCAGCCCTCGTTGGTGGGGAAGTCTGTCCACAAGCAAGTAAAGAAGAGGAAGAAGATCGAGCAAAAGCAGAAAGGACAATTGAAGAAGAGGAAAGTCGCTATGCAAACTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_45956.p1 GENE.S_Transcript_45956~~S_Transcript_45956.p1 ORF type:complete len:574 (+),score=98.82,DEAD|PF00270.25|1.5e-25,DEAD|PF00270.25|2.4e+03,Helicase_C|PF00271.27|1.1e+02,Helicase_C|PF00271.27|3.6e-23,DUF4217|PF13959.2|5.3e-17 S_Transcript_45956:1527-3248(+)
MANFCKLSITTKCKKWTEYAGPGFLDDFWPIFFKTFLGTCGFLHSTSCWHTASGLGCYTYVLVITTIFVTDSFLATALVLVPTRELCMQVYEILQKLLHRFHWIVPGYLMGGENRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYTNLRWLIFDEADRILELGFGKEIQEILDILGSCQNNIAGQESGTARIFKFQRQNLLLSATLNEKVNHLAKISLENPVMIGLSGRKLQQTSFPEHSGSIVSEDDEEAAEQTGRVISSSSEDYNLPSQLVQRYVKVPCGSRLAVLVSVLKNLFEREATQKVVVFFSTCDAVDFHYSLLKDFSWPPSSEAETEKRRLFLNNKIFRLHGSMEHEERRTTFQAFKTDKSALLLSTDVSARGLDFPKVRCIIQYDSPGEATEYVHRVGRTARLGQRGDSLLFLQPIEMDYLQDLKKHGVSLTEYPLEKVLDSFPLYGQKRLPKKVLSIDMHPWVVGLQKALEAFILAKANIKKMAQAAFTSWVRAYTAHRGELKRIFMVKKLHLGHVAKSFALKEQPSLVGKSVHKQVKKRKKIEQKQKGQLKKRKVAMQT*

Click here to download the sequence:
Link to NCBI Protein BLAST