Transcript Information: S_Transcript_45972.p1


Annotated TAIR IDAT5G03260.1
Annotated Gene Namelaccase 11
Annotated Gene Symbol(s)LAC11
Annotation TypeOrtholog
Chromosome Positionchr5:777198-779338 | Reverse length=557
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.89495048401492
Replicate 20.97622962643871
Replicate 31.4688904845346
Condition 2: 8 Hour
Replicate 10.83036918049013
Replicate 21.46505911446
Replicate 31.5090865561049
Condition 3: 24 Hour
Replicate 10.81193372265925
Replicate 21.1231623436066
Replicate 31.8302722488668


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_45972.p1 GENE.S_Transcript_45972~~S_Transcript_45972.p1 ORF type:complete len:565 (+),score=57.47,Cu-oxidase|PF00394.18|3.6e+02,Cu-oxidase|PF00394.18|7.3e-45,Cu-oxidase|PF00394.18|31,Cu-oxidase_2|PF07731.10|0.79,Cu-oxidase_2|PF07731.10|2.4,Cu-oxidase_2|PF07731.10|1.2e-39,Cu-oxidase_3|PF07732.11|1.8e-42,Cu-oxidase_3|PF07732.11|1.5e+02,Cu-oxidase_3|PF07732.11|8.7e+03,Cu-oxidase_3|PF07732.11|32 S_Transcript_45972:58-1752(+)
ATGGCGAGCTCAGACAATAGGTTTCATCATGTTCATGCAAAATGTTTGATTTTCACCTTCCTAGCTTTTCTCTTCGTTCCGCTTGAAGCCGCTGTGAAGACGTACCAATTTGATATTCAAATGAAAAACGTGAGCAGGCTTTGTCATGCAAAACCAATTGTGACGGTGAATGGGATGTATCCTGGACCAACTGTTTATGCGACGGAAGGGGATAGAGTTATAATTAATGTTACTAACCATGCACAATATAACATGTCTATTCATTGGCATGGTTTAAAACAATATCGAAATGGTTGGGCGGATGGACCTGCATATATAACTCAATGTCCGATCCAAACTGGAAACAGCTACACCTACGACTTCAATGTCACAGGCCAAAGGGGAACTCTATGGTGGCACGCGCATATTCTTTGGCTAAGGGCAACTGTTTTCGGGGCCTTGGTCGTCTTGCCGAAACCAGGGACTCCTTATCCATTTCCAAAGCCTCACATGGAAGCTAACTTAGTCTTTGGAGAGTGGTGGCACAAAGATGTTGAGCTAATTGAAAAGCAAGGCAATGACATGGGATTGCCACCAAATATGTCTGATGCTCATACAATCAACGGAAAGCCAGGACCACTATTTCCTTGCTCTGAGAAGCACACTTACGCCTTGGAGGTTGAGAGAGGGAAGACATACCTGTTAAGAATCGTCAATGCTGCCCTCAATGATGAGCTCTTCTTTGCAATCGCTGGTCACAAAATGACCGTAGTGGAGGTTGATGCAGTCTATGTCAAGCCCTTCACCACCGAAACCATTCTCATAGCCCCGGGCCAAACTACAAACGTTTTAGTCCAAGCAAAACAAAACCCTGGCCGTTACTTCATGGCCACAAGGACCTTCATGGACGCACCTATCCCAGTCGACAACAAGACAGCCACAGCCATACTACAATACAAAGGTGTACCAACCACCATAATTCCAACCTTCCCTCAGCTCCCAGCACCAAACGACACCGCCTTGTCATTGAGCTACAACAAGAAGATCAGGAGCCTCAACACGGCTCAATATCCGGCCAATGTGCCTTTGAAGGTGGATAGAAGATTGTTTTACACTATCGGTCTAGGAGCAAACCCTTGCCCTGCATGTCTCAATGGTACTCGCCTTACGGCCTCCTTGAACAACATTACCTTTGCAATGCCAAAAACAGCGCTGTTACAGGCTCATTACTTCAACATCTCTGGTGTCTACAAGACTGATTTCCCTGACAAACCCCCTAAGCCGTTTAACTACACCGGAGCTCCGCTCACCGCTAACCTTAGGACAGTCCAAGGAACAAGGATCAATAAGATTGCCTTCAATTCCACCGTTGAGCTGGTTTTGCAGGACACCAACTTGCTAACTGTAGAGTCTCATCCATTTCACCTTCATGGATATAACTTCTTTGTGGTTGGGACTGGGATCGGTAACTTTGATCCGGCTAAGGACACTGGTAAGTTTAATTTGGTTGATCCTCCTGAGAGGAACACCGTTGGTGTCCCCACTGGTGGTTGGACCGCTATCCGGTTTAGAGCTGATAACCCAGGTGTATGGTTTATGCATTGTCATTTGGAGCTGCATACAGGATGGGGATTGAAGACGGCATTTGTGGTGGAAAATGGACCTGGACCACAATATTCTGTGTTGCCTCCACCTAAAGATCTTCCACCATGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_45972.p1 GENE.S_Transcript_45972~~S_Transcript_45972.p1 ORF type:complete len:565 (+),score=57.47,Cu-oxidase|PF00394.18|3.6e+02,Cu-oxidase|PF00394.18|7.3e-45,Cu-oxidase|PF00394.18|31,Cu-oxidase_2|PF07731.10|0.79,Cu-oxidase_2|PF07731.10|2.4,Cu-oxidase_2|PF07731.10|1.2e-39,Cu-oxidase_3|PF07732.11|1.8e-42,Cu-oxidase_3|PF07732.11|1.5e+02,Cu-oxidase_3|PF07732.11|8.7e+03,Cu-oxidase_3|PF07732.11|32 S_Transcript_45972:58-1752(+)
MASSDNRFHHVHAKCLIFTFLAFLFVPLEAAVKTYQFDIQMKNVSRLCHAKPIVTVNGMYPGPTVYATEGDRVIINVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIQTGNSYTYDFNVTGQRGTLWWHAHILWLRATVFGALVVLPKPGTPYPFPKPHMEANLVFGEWWHKDVELIEKQGNDMGLPPNMSDAHTINGKPGPLFPCSEKHTYALEVERGKTYLLRIVNAALNDELFFAIAGHKMTVVEVDAVYVKPFTTETILIAPGQTTNVLVQAKQNPGRYFMATRTFMDAPIPVDNKTATAILQYKGVPTTIIPTFPQLPAPNDTALSLSYNKKIRSLNTAQYPANVPLKVDRRLFYTIGLGANPCPACLNGTRLTASLNNITFAMPKTALLQAHYFNISGVYKTDFPDKPPKPFNYTGAPLTANLRTVQGTRINKIAFNSTVELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPAKDTGKFNLVDPPERNTVGVPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFVVENGPGPQYSVLPPPKDLPPC*

Click here to download the sequence:
Link to NCBI Protein BLAST