Transcript Information: S_Transcript_459764.p2


Annotated TAIR IDAT5G55840.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:22598038-22601688 | Forward length=1136
E-Value3E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.53226002470361
Replicate 20.22062789557515
Replicate 30.36885472167201
Condition 2: 8 Hour
Replicate 10
Replicate 20.6711554591918
Replicate 30.42631695209963
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.50444088810232


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_459764.p2 GENE.S_Transcript_459764~~S_Transcript_459764.p2 ORF type:complete len:100 (-),score=21.53,PPR_2|PF13041.2|2.4e-15,PPR_1|PF12854.3|7.1e-09,PPR_1|PF12854.3|0.35,PPR|PF01535.16|6.1e-08,PPR|PF01535.16|13 S_Transcript_459764:468-767(-)
ATGCAAGGGCTAAAGGCTGGAATTCCATCTTCAACATCAAAAACTTCTCTTATTCCTCTGTCATCTTTATTTAGTAATCCATCATCATCATCCCATGTTTTACCTTCTGCAAATCCCAGACCTGATATTTCCACTTACAATACGGTCATTAATTGGTACTGTAAGAAAGAGATGCATTCCCAAGCAATCAAGTTTCTTCAGAAAATGGAAGAAGGGGGTTGCCCCCAGGACTCCATTTCCTACAATATCATCATTCAGGAGCTTCTTCAAGCAAATGAGACTGATAACGCTGTGGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_459764.p2 GENE.S_Transcript_459764~~S_Transcript_459764.p2 ORF type:complete len:100 (-),score=21.53,PPR_2|PF13041.2|2.4e-15,PPR_1|PF12854.3|7.1e-09,PPR_1|PF12854.3|0.35,PPR|PF01535.16|6.1e-08,PPR|PF01535.16|13 S_Transcript_459764:468-767(-)
MQGLKAGIPSSTSKTSLIPLSSLFSNPSSSSHVLPSANPRPDISTYNTVINWYCKKEMHSQAIKFLQKMEEGGCPQDSISYNIIIQELLQANETDNAVD*

Click here to download the sequence:
Link to NCBI Protein BLAST