Transcript Information: S_Transcript_46008.p1


Annotated TAIR IDAT5G11880.1
Annotated Gene NamePyridoxal-dependent decarboxylase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3827806-3829942 | Reverse length=489
E-Value1.3E-292
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 183.833652978165
Replicate 285.208014842816
Replicate 397.937288168086
Condition 2: 8 Hour
Replicate 1102.69062193281
Replicate 298.200163197502
Replicate 399.488367827712
Condition 3: 24 Hour
Replicate 165.00292916978
Replicate 262.428917080486
Replicate 367.020036857408


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_46008.p1 GENE.S_Transcript_46008~~S_Transcript_46008.p1 ORF type:complete len:493 (+),score=118.22,Orn_Arg_deC_N|PF02784.12|8.5e-48,Orn_DAP_Arg_deC|PF00278.18|5.5e+03,Orn_DAP_Arg_deC|PF00278.18|6e-16,Ala_racemase_N|PF01168.16|1.1e-06 S_Transcript_46008:158-1636(+)
ATGGCGGCTACACACCTTCTCTCTCAATCAACAACAATCCCTAAAACCCTAAACCTCACACCAAACTCCAAAACCCCATTTCTCCCAAAACCCTTTATCACCACCCTTCACAAAAAACCCGCCTCCCTAAAACCCTTAACTTTCAAGGCAGTCCTTTCTCAGAGCAGCCCAGCTACAAAGATTGCAACTTCTGACCCCAAAACTGGCAATTTCAAGCATTGCTTCACAAAAGGGCAAGATGGGCATTTGTATTGTGAAGGCCTTAAGGTGCAGGAAATCATGGAGAATGTTGAAAAGAGGCCATTTTATCTTTATAGTAAACCCCAGATAACTAGGAACTTTGAAGCTTATAAGGATGCCCTTCAAGGGTTGAGATCAGTTATTGGGTATGCTATCAAGGCTAATAATAATTTGAAGATTTTGGAGCATTTGAGGGGGTTGGGTTCTGGGGCTGTTCTTGTTAGTGGTAATGAGCTCAGGCTGGCTTTGGCTGCAGGGTTTGATCCCACCAAGTGTATTTTCAATGGGAATGGGAAGTTGCTGGAGGATTTGGTCCTCGCAGCTGAGAGCAGTGTTTTTGTAAATGTGGACAGTGAGTTTGACTTGGACAATATTGTTGCAGCTGCTAGAATTGCAGGGAAAAAAGTGAATGTGTTGCTTCGCATTAATCCTGATGTTGATCCTCAGGTCCATCCTTATGTTGCCACTGGGAATAAGAACTCCAAGTTTGGAATTAGAAATGAGAAATTACAATGGTTTCTAGATGCTGTGAAAGCACATCCCAATGAGTTGAAGCTGGTTGGAGCACATTGTCATCTTGGGTCAACAATCACCAAGGTTGACATTTTTAGGGATGCAGCTGTCCTCATGGTGAACTACATAGACCAAATTCGTGAGCAAGGTTTTGAGATTAGTTACTTAAACATTGGAGGTGGTTTGGGAATAGACTATTATCACGCTGGTGCTGTCCTTCCTACACCCAGAGATCTCATTGACACTGTACGGGAACTCGTCCTATCACGAGATCTCAACCTTATCATTGAGCCTGGAAGATCACTTATTGCAAATACTTGTTGTTTTGTCAATCGTGTCACTGGTGTCAAAACTAATGGCACAAAGAACTTTATTGTGATTGATGGAAGCATGGCTGAACTTATCCGACCAAGTCTGTATGATGCTTATCAACATATAGAGCTAGTTTCTCCTACTCCACCAGATGCAGAGGAATCCACTTTTGATGTGGTGGGTCCTGTCTGTGAGTCAGCTGATTTCTTGGGCAAGGAGCGCAAACTTCCCACTCCTGAGAGGGGAGCTGGATTGGTGGTTCATGATGCGGGTGCCTATTGCATGAGTATGGCCTCTACTTACAATCTCAAGATGCGCCCACCGGAATACTGGGTTGAGGAAGATGGATCGATTGCCAAGATCCGGCATGGGGAGACATTCGAAGACCATTTGAGATACTTTACCGGTCTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_46008.p1 GENE.S_Transcript_46008~~S_Transcript_46008.p1 ORF type:complete len:493 (+),score=118.22,Orn_Arg_deC_N|PF02784.12|8.5e-48,Orn_DAP_Arg_deC|PF00278.18|5.5e+03,Orn_DAP_Arg_deC|PF00278.18|6e-16,Ala_racemase_N|PF01168.16|1.1e-06 S_Transcript_46008:158-1636(+)
MAATHLLSQSTTIPKTLNLTPNSKTPFLPKPFITTLHKKPASLKPLTFKAVLSQSSPATKIATSDPKTGNFKHCFTKGQDGHLYCEGLKVQEIMENVEKRPFYLYSKPQITRNFEAYKDALQGLRSVIGYAIKANNNLKILEHLRGLGSGAVLVSGNELRLALAAGFDPTKCIFNGNGKLLEDLVLAAESSVFVNVDSEFDLDNIVAAARIAGKKVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITKVDIFRDAAVLMVNYIDQIREQGFEISYLNIGGGLGIDYYHAGAVLPTPRDLIDTVRELVLSRDLNLIIEPGRSLIANTCCFVNRVTGVKTNGTKNFIVIDGSMAELIRPSLYDAYQHIELVSPTPPDAEESTFDVVGPVCESADFLGKERKLPTPERGAGLVVHDAGAYCMSMASTYNLKMRPPEYWVEEDGSIAKIRHGETFEDHLRYFTGL*

Click here to download the sequence:
Link to NCBI Protein BLAST