Transcript Information: S_Transcript_460303.p1


Annotated TAIR IDAT5G04430.2
Annotated Gene Namebinding to TOMV RNA 1L (long form)
Annotated Gene Symbol(s)BTR1, BTR1L
Annotation TypeHomolog
Chromosome Positionchr5:1250602-1253523 | Reverse length=334
E-Value4E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.51178848529193
Replicate 20.2121422072838
Replicate 30.17733400080385
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.10896063257859
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_460303.p1 GENE.S_Transcript_460303~~S_Transcript_460303.p1 ORF type:internal len:208 (+),score=-0.29,KH_1|PF00013.25|1.4e-11,KH_1|PF00013.25|2.1e-10,KH_3|PF13014.2|1.2e-11,KH_3|PF13014.2|7.7e+03,KH_3|PF13014.2|2.9e-08,KH_2|PF07650.13|0.0041,KH_2|PF07650.13|0.073,KH_4|PF13083.2|0.0015,KH_4|PF13083.2|2.4 S_Transcript_460303:2-622(+)
GCAAGCCCGAATCCACAACTTGCTGCATCTTGTCCCTTCAAACTTGCACGCGCACCCCACCCCCCATTTTGCACAATGGTCGACGACGTTGAGGACATGGACGCTCAGGACGCCCAAGCTATGGACAACACGGCCCACATCTCGCTGAAGGTGCTCGGCGAGCATCAGCACGCCGGGTGCGTGATTGGCAAGCAAGGCTCCACCATCTCTGAAGTGCAGCAGGCCTCTGAAGCGAAGATCCAGATCTCAGGCCCCAGCGACGTCTTCCCGGGCACCACTGAGCGCATCATTCACCTCAGTGGCGAAATGCTCAAGGTGCTCTCTGCCCTGCACATGGTCCTCTCGCGCTGGAAGTCCGAGGCCATTTTTGCGGATGCGCCAGACGTGGGCGAGGAGCAGGTGCAGCTGCGCATGTGCATGCTCGGCAAGCTCTGCGGCGCAGTGATCGGCGAGGCCGGCAAGAACATCAACGACATCAAGGCCGCAACGAATACCGACATTCGCGTGCAGGGCCGGGACGAGTGCGTGCGCGGCGCCAGCGAGCGGATCATCACCATCGCTGGCGAGGATAACCATGTGCTCCAGGCCCTCGGCCGCATCCACCAGGCGTGCACGGCGGCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_460303.p1 GENE.S_Transcript_460303~~S_Transcript_460303.p1 ORF type:internal len:208 (+),score=-0.29,KH_1|PF00013.25|1.4e-11,KH_1|PF00013.25|2.1e-10,KH_3|PF13014.2|1.2e-11,KH_3|PF13014.2|7.7e+03,KH_3|PF13014.2|2.9e-08,KH_2|PF07650.13|0.0041,KH_2|PF07650.13|0.073,KH_4|PF13083.2|0.0015,KH_4|PF13083.2|2.4 S_Transcript_460303:2-622(+)
ASPNPQLAASCPFKLARAPHPPFCTMVDDVEDMDAQDAQAMDNTAHISLKVLGEHQHAGCVIGKQGSTISEVQQASEAKIQISGPSDVFPGTTERIIHLSGEMLKVLSALHMVLSRWKSEAIFADAPDVGEEQVQLRMCMLGKLCGAVIGEAGKNINDIKAATNTDIRVQGRDECVRGASERIITIAGEDNHVLQALGRIHQACTAA

Click here to download the sequence:
Link to NCBI Protein BLAST