Transcript Information: S_Transcript_46040.p1


Annotated TAIR IDATMG00860.1
Annotated Gene NameDNA/RNA polymerases superfamily protein
Annotated Gene Symbol(s)ORF158
Annotation TypeHomolog
Chromosome PositionchrM:235916-236392 | Forward length=158
E-Value1E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.35055544985968
Replicate 20.84763735950935
Replicate 30.64782387999475
Condition 2: 8 Hour
Replicate 10.46817541859787
Replicate 20.44203433097155
Replicate 30.65515228643192
Condition 3: 24 Hour
Replicate 10.93518162034377
Replicate 20.6219487260249
Replicate 30.4706638363194


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_46040.p1 GENE.S_Transcript_46040~~S_Transcript_46040.p1 ORF type:5prime_partial len:911 (-),score=93.96,RVT_1|PF00078.23|2.8e-26,RVT_1|PF00078.23|2.8e+03,RVT_3|PF13456.2|1.6e-20,RNase_H|PF00075.20|3.4e-05 S_Transcript_46040:9178-11910(-)
ATCGCTGATAAGATCGTGCCCCGCATTCTGGTCGACACGGGGAGCTCGGCCGACATCATTCATCTAAGCTGTCTGGACAAGCTGAGCTTCTGCAAGGAGCAGTTAATCCCGGTAAGTAATGCCGTGTACGGGTTCGGTGGAAATGCTGTCTACCCGGTGGGAACTGTGACTCTGCCTATTCGGGTGAATAGAGGTCCAGTAGCCAGACACCATACGGTCGAGTTCTTGGTGATTGACACTCCTTTGGCGTATAACGTCATCATAGGTCGGCCAACTTTGAACGCCATCAAAGCCGTCGTAGCAACTCACATGCTGCTCATGCAGTACGAGTCAAACGACGGGAAGGCGGGCAAGTTGTATGGCGACCAGCGAACTAGCAGGGAATGTTACCTTGCTGATTTGAAGGGATGGACGGCCAAGCCAGAGCTCGGTTCTAAGAGAAAAATAGATGAGCTCGGCCCCCAAATCATGATGATGGAACACCTGGATGCTCGGCTTGACAACGAGCCCCATCCAGAGCCGATGGACGAAACCGAGGAGGTCCAGCTTGACCGTGCTCGTCCCGACAGGACGGTCATTATGGGGAGAATGGAAGCATCTTTGGCTGAGCTCACCAAGCAGGTGATTTGTGAACACGCTGATGTGTTTGCCCACTCAGTCGAGGATATGCCAGGCATTGACCCCTCGGTGGCCGAGCACAGACTCAACATCAAGGCCAATGTCTCCCCAGCCCAGCAGAAGAAAAGGAACATGGGACCGGAAAGATCCCAAGCAGCAAATGAAGAAGTAGACAAGTTGTTGGAGGCCGGTTTCATCAGGGAGTGTCAATACCCGGGGTGGTTGTCCAACGTGGTCATGGTGCGAAAGGCAAACGGGTCGTGGAAGATGTGTGTAGACTTCACCGACCTAAACAAGGCCTGTCCGAAGGACCATCACCCCCTACCCCGGATAGACAGGCTGGTGGACTCGACAGCAAGCCATGCCATGCTCAGCTTCCTCGACGCCTTCTCGGGGTATCATCAGATACCTCTCCACCGGGAGGACCAGGAAAACACTGCTTTCATTGTTGACCGAGGAGTCTACTGCTACCAAGTTATGCCATTCGGATTAAAGAATGCGGGTGCTACATACCAGAGGATGGTTGATAGGATGTTTGAAGGACAAATCGGACGCAACATGGAGGTGTACGTCGATGACATGATTGTTAAGAGCAAAACAGCGGAGCAGCACCCAGCCGATTTGAGAGAGACCTTTCAGTGTCTAAGGAGGCACAGGATGAAACTCAATCCCAAAAAATGCACCTTTGGCGTGTCCTCGGGCAAGTTCCTTGGTTTCCTGATCAGTCAGAGGGGGATTGATGTCAACCCGGACAAAGTGCAGGCCATAGCAGACATGAAACCCCCGAGGTCCATAAAGGAGGTGCAGAAGCTCGCCGGGTGCGTGGCGGCCTTGAGGCGGTTTATGTCCAAGTCGGCCGAAAAGTGCATGCCATTCTTCGATGTCTTAAAGAAGAAGGCTAAGTTTGAGTGGACTCAGGCTGCCCAGCTCTCCTTTGAGAAATTGAAGGAGCATTTGAGATCCCTGCCAAGGATGGTGAGCCCTGAGGTCGGGGAAACCCTTTACCTCTACCTCTCGGTATCTGAAGTGGCTGTGAGCTCGGTCTTGGTTGCTGAAAGGGATCAAGAGCAGAAACCGGTTTACTTCATCAGTCACGCCCTATGCGGTCCCCAGTTGCGCTACTCGGATTTGGAAAAGTTCGCCCTAGCTCTGCTGCTTACACACCGCAAGCAGTACCCCTACTTCCAATCAAACCAAGTAGTGGTCCTCACAAATCAACCATTGAAGAAGGTGATGGAGAGACTGGATTGCGCCGGGCGCATGCAAGTATGGGCAGCGGAGATGTCAGGCCCGGGGTGTCCCCAATATGAACCTCGGCGGGCCATCAAGGCTCAGCCCCTGGCTGATTTCATAGTTGAGTGTACTCGGGATGAAGAATACCTGGATTGCCCAATGACGGAGTGGTGGCGCCTCTTTGTGGATGGCTCTGCTACAATGAGAGGCAATGGAGCAGGGGTGATCATCATTGATCCGAGTGGCTACAAGTCAGAGTATGCGGTCAGGATCAACTTCAAAGCCTCCAACAACGAGACCGAGTATGAGGCACTCTTGAGTGGGCTCGGGATGGCAAGCTCGGCCAAAGCTCAAAAGGTAGATGTCTTCACTGACTCATTGCTTGTAGCGGGGCAAATATCTGGGGAGTACTCGGCCAAGGAACCGCGTATGCAGCTCTACCTCGAGAAAGTGAAAGCAGTCTTGTCTACCTTCCAGCAGTACCGAGTAACCCACATAGCTCGGTCAGAGAATCAAGAAGCTGATGCCTTGGCTAGGCTAGCCAGTTCTTCTCTGAGCGACAAGCCAAGGACGGTGTACTGGGAAGTCCTCGGGAAGCGCAGCATCGAGGTCGGGGAAAATCTGTGGATTGACAGGTCGGAGACCTGGATGGACCCCATCAAGGATACCTCCAAAGGGGCACCCTGCCTGTGGATCCTAAGGAAGCAGCCCGGGTACAAACGAAGTCCAAATGGTTCGCACTGCATGAAGGGGTCCTATACAAAAAGTCATTCACCCAGCCCTGGCTCAAGTGTCTTGGCCCAGACCGGGGAAGAGCGGTGTTGGAAGAGCTGCATCAAGGAATATGCTCGGCCCATATGGGGGGCAGGGCTTTGTCCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_46040.p1 GENE.S_Transcript_46040~~S_Transcript_46040.p1 ORF type:5prime_partial len:911 (-),score=93.96,RVT_1|PF00078.23|2.8e-26,RVT_1|PF00078.23|2.8e+03,RVT_3|PF13456.2|1.6e-20,RNase_H|PF00075.20|3.4e-05 S_Transcript_46040:9178-11910(-)
IADKIVPRILVDTGSSADIIHLSCLDKLSFCKEQLIPVSNAVYGFGGNAVYPVGTVTLPIRVNRGPVARHHTVEFLVIDTPLAYNVIIGRPTLNAIKAVVATHMLLMQYESNDGKAGKLYGDQRTSRECYLADLKGWTAKPELGSKRKIDELGPQIMMMEHLDARLDNEPHPEPMDETEEVQLDRARPDRTVIMGRMEASLAELTKQVICEHADVFAHSVEDMPGIDPSVAEHRLNIKANVSPAQQKKRNMGPERSQAANEEVDKLLEAGFIRECQYPGWLSNVVMVRKANGSWKMCVDFTDLNKACPKDHHPLPRIDRLVDSTASHAMLSFLDAFSGYHQIPLHREDQENTAFIVDRGVYCYQVMPFGLKNAGATYQRMVDRMFEGQIGRNMEVYVDDMIVKSKTAEQHPADLRETFQCLRRHRMKLNPKKCTFGVSSGKFLGFLISQRGIDVNPDKVQAIADMKPPRSIKEVQKLAGCVAALRRFMSKSAEKCMPFFDVLKKKAKFEWTQAAQLSFEKLKEHLRSLPRMVSPEVGETLYLYLSVSEVAVSSVLVAERDQEQKPVYFISHALCGPQLRYSDLEKFALALLLTHRKQYPYFQSNQVVVLTNQPLKKVMERLDCAGRMQVWAAEMSGPGCPQYEPRRAIKAQPLADFIVECTRDEEYLDCPMTEWWRLFVDGSATMRGNGAGVIIIDPSGYKSEYAVRINFKASNNETEYEALLSGLGMASSAKAQKVDVFTDSLLVAGQISGEYSAKEPRMQLYLEKVKAVLSTFQQYRVTHIARSENQEADALARLASSSLSDKPRTVYWEVLGKRSIEVGENLWIDRSETWMDPIKDTSKGAPCLWILRKQPGYKRSPNGSHCMKGSYTKSHSPSPGSSVLAQTGEERCWKSCIKEYARPIWGAGLCP*

Click here to download the sequence:
Link to NCBI Protein BLAST