Transcript Information: S_Transcript_460443.p1


Annotated TAIR IDAT3G17060.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:5816953-5818458 | Reverse length=344
E-Value5.3E-161
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.97456060861224
Replicate 20.49718962383132
Replicate 30.987076015742
Condition 2: 8 Hour
Replicate 10.72085826424111
Replicate 20.88227008720049
Replicate 30.72053569368951
Condition 3: 24 Hour
Replicate 10.55381394764887
Replicate 21.3406761777558
Replicate 30.35524006204389


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_460443.p1 GENE.S_Transcript_460443~~S_Transcript_460443.p1 ORF type:complete len:355 (+),score=61.30,Pectinesterase|PF01095.15|6.1e-62 S_Transcript_460443:567-1631(+)
ATGAATTTGTTATCTTCATCATCTTCTTCTTCTTCATTAACAAAGGCAACAATTTCGATTGCCTTAGCCATTGTTTTCTTTGTACAGATTGTTGATGCATCAACTAGCCATGAATTACAAGTTCATAAAATCATTGATGCTCCTCACCTAACTGAAAAGATTCATACCAACCATACAATTTTGGTTGATATCAATGGCAATGGACACTTCAAATCTGTTCAAGCTGCAATTGATTCTGTTCCAGATGGGAATTCCAATTGGGTTATCATCCATGTTAGGAAAGGAGTTTACAAGGAGAAGGTGCACATACCCCATTCTAAGCCTTACATATTCTTAAGAGGGAATGGTAAGGGTAGAACTTTTATAACTTGGTCACAAAGCTCGGATGACAACATTGAGTCCGCCACATTCAGAGCTGAAGCCCCTCATTTCGTTGCCTTTGGAATAAGCTTCAAGAATGAGGCACCAACAGGGGAAGCATACACATCGCAGAATCAATCGGTGGCAGCATACGTGGCATCAGACATGGCTGCCTTTTACCATTGTGGGTTTTTCAGCACTCACAACACTCTCTTTGATGCCAAGGGTAGACATTACTATTATGCTTCTTACATCCAAGGCTCCATTGACTTCATCTTTGGCCGTGCTCGTTCCCTTTATTACGATTGTGAGATATTAGTGCTGGTGGATCGGAGGGTGAAAATACATGGCTCAATCACAGCTCATAATAAGGAACATGCAGAGGAGGAAAGTGGATTTGTGTTTAATGAGGGAAGAGTTTATGGCACAGACCAAGTTTATTTGGGTAGAGCTAGAGGTGCTTACTCAAGGGTGGTCTTTGCTAACATGTATTTGTCTAATACTATTACACCTGAGGGATGGACTAACTGGAGTTATGATGGCCCTACAGAGCACCTATTCCATGCAGAGTACTCATGCCATGGACCAGGATCAAACACAGGGGAAAGAGCTCCTTGGAGTAAAAGGCTTAGTGAGGAAGAAGCTGCTCCTTTCTTGTCCATTGATTTCATTAATGGCAAGGAATGGTTGCCAGCTTGGCTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_460443.p1 GENE.S_Transcript_460443~~S_Transcript_460443.p1 ORF type:complete len:355 (+),score=61.30,Pectinesterase|PF01095.15|6.1e-62 S_Transcript_460443:567-1631(+)
MNLLSSSSSSSSLTKATISIALAIVFFVQIVDASTSHELQVHKIIDAPHLTEKIHTNHTILVDINGNGHFKSVQAAIDSVPDGNSNWVIIHVRKGVYKEKVHIPHSKPYIFLRGNGKGRTFITWSQSSDDNIESATFRAEAPHFVAFGISFKNEAPTGEAYTSQNQSVAAYVASDMAAFYHCGFFSTHNTLFDAKGRHYYYASYIQGSIDFIFGRARSLYYDCEILVLVDRRVKIHGSITAHNKEHAEEESGFVFNEGRVYGTDQVYLGRARGAYSRVVFANMYLSNTITPEGWTNWSYDGPTEHLFHAEYSCHGPGSNTGERAPWSKRLSEEEAAPFLSIDFINGKEWLPAWL*

Click here to download the sequence:
Link to NCBI Protein BLAST