Transcript Information: S_Transcript_460503.p1


Annotated TAIR IDAT3G14880.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: transcription factor-related (TAIR:AT4G18650.1); Has 560 Blast hits to 560 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 558; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:5006565-5007689 | Forward length=244
E-Value2E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.13895558161321
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_460503.p1 GENE.S_Transcript_460503~~S_Transcript_460503.p1 ORF type:3prime_partial len:161 (-),score=-9.20,DOG1|PF14144.2|1.3e-25 S_Transcript_460503:1-480(-)
ATGGCAACAAATTTTCACCGATATCACGTTTTATGGACCGATCAACTCCGTCAACTCACAACCCAACTCAGCAATACCCCGGCCCGACTCCAGTCCCATGACGACAACCACCAGGCCCGACGCCTCGTCGAGAAGGTGGTCACCCACTACGAGGACTACCACCGGGCCAAGTCGGCCCTGGCCCAGTCCGACATCCTGGCCCTCTTCGCCGCCCCCTGGGCCTCCACCCTCGAGCGGGCCCTCTACTGGGTCGCGGGCTTCCGGCCCACCACCATCTTCCACCTTGCCTACACCGAGTCCAGCATCCGATTCGAGTCCCGGGTCGGCGACATCCTCCGCGGCCGCCGGACAGGGGACCTCGGGGAGCTCAGCGCAGCCCAGCTGGCCCGGGTCAGCGAGCTCCAGTGCCTCACCGTCAAGGAAGAGAACGAGATCGGCGACGAGCTGGGCGTCTGGCAGGAGGCCGTCGCCGGCGCCGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_460503.p1 GENE.S_Transcript_460503~~S_Transcript_460503.p1 ORF type:3prime_partial len:161 (-),score=-9.20,DOG1|PF14144.2|1.3e-25 S_Transcript_460503:1-480(-)
MATNFHRYHVLWTDQLRQLTTQLSNTPARLQSHDDNHQARRLVEKVVTHYEDYHRAKSALAQSDILALFAAPWASTLERALYWVAGFRPTTIFHLAYTESSIRFESRVGDILRGRRTGDLGELSAAQLARVSELQCLTVKEENEIGDELGVWQEAVAGAE

Click here to download the sequence:
Link to NCBI Protein BLAST