Transcript Information: S_Transcript_460640.p1


Annotated TAIR IDAT5G41790.1
Annotated Gene NameCOP1-interactive protein 1
Annotated Gene Symbol(s)CIP1
Annotation TypeHomolog
Chromosome Positionchr5:16727530-16732391 | Forward length=1586
E-Value4E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.16222639380526
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.32899777411363
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_460640.p1 GENE.S_Transcript_460640~~S_Transcript_460640.p1 ORF type:3prime_partial len:136 (+),score=44.89 S_Transcript_460640:39-407(+)
ATGGTGGAGGAGCGAGAACTTCTGTCGCTTGCTCAAATGTATAGGGTTCATCAGAAGGAAGCTTCATCTTTGATCAAGGAATTAGAATCGGAGCTTACTTCCTTGAACCTTGGGTTCGCTTCCTTGTGCACTGACAAACAGGTGTTGGAAAATCAACAAGAGGAGACCAAAAACCTGCAAGATCGGGTTTCTAAGCTTGAGAAGATTGAGAAAGAGATGGAGGCAGAGCTTAATGCACTCATAAATGGGGCTGATAATAAGCTTGAAAATGGTTCAGTTTCTGAGGGGTCGAAAATTAAAGGATTGATGGAACAAGTGAGCAATCTGAAACGGAATTTGAATTGTTTGAGTGCTGAAAAAGGTGATTCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_460640.p1 GENE.S_Transcript_460640~~S_Transcript_460640.p1 ORF type:3prime_partial len:136 (+),score=44.89 S_Transcript_460640:39-407(+)
MVEERELLSLAQMYRVHQKEASSLIKELESELTSLNLGFASLCTDKQVLENQQEETKNLQDRVSKLEKIEKEMEAELNALINGADNKLENGSVSEGSKIKGLMEQVSNLKRNLNCLSAEKGDS

Click here to download the sequence:
Link to NCBI Protein BLAST