Transcript Information: S_Transcript_460713.p1


Annotated TAIR IDAT5G42905.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:17201414-17202323 | Reverse length=258
E-Value7.8E-53
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.24584758646818
Replicate 20.20381329845279
Replicate 30.12777877194181
Condition 2: 8 Hour
Replicate 10.19700129623217
Replicate 20.2066683477111
Replicate 30.24614142730925
Condition 3: 24 Hour
Replicate 10.050450077345483
Replicate 20.10468273245426
Replicate 30.058249525185026


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_460713.p1 GENE.S_Transcript_460713~~S_Transcript_460713.p1 ORF type:internal len:433 (+),score=63.11,RVT_3|PF13456.2|3.6e-19,zf-RVT|PF13966.2|2.9e-17,zf-RVT|PF13966.2|2.3e+02,zf-RVT|PF13966.2|6e+03 S_Transcript_460713:3-1298(+)
AACATAGCCAATGGCCAGTCTACTCGCTTTTGGACTGACTGTTGGCTAGGTCCTGAGCCACTCCTCTCCCAAGCTACTTGCAACATTGCTGATCATGAGCAACTTCGCTCAGTAGTTGATTATTGGGATGTGGATCATGGCTGGAAATTGGAAGAAATTGGAGGTAAAGTGCCTGCCCTCACACTGTTGAGGCTTGTTGCTGTTCACGTTAAAACTGAAGGAGCGCATCAGGATACTCTAGTCTGGCTTCGTAGTACATCAGGCGTATTCTCCACCTCCTCAGCCTATGATCTAATAAGGTCCAAAGACAAGGATATTGTTGATAAAATTTGGCAAGCTATTTGGTCAGTCTCAAGCCCAGAGAAATTCCGAACCTTTGCTTGGCAAGCAGCCCACAATCGCATTCTTACCAATCAGTTGCGTTGGAAGCGAGGTATGGCGGTCTCCCTTGTTTGTGAATATTGTGAACTCAATCAGGAAGACACTCTCCATGTCCTGCGAGATTGTCATGCCGCATCGCTTATTTGGAACAAATTTGTCAAAGCCCAAGCAAAGGTTGACTTTTACACTTGGTCTCTTAGGGACTGGCTCTACTTCAACTGCACAACCAATCTGGGGAATAATCAGGCCACTGATTGGCCTAGACTTTTCTTTACTATTATTTGGTTCCTCTGGAGATGGAGATGTTATCGGGTCTTCGGTGGGCACACGCGCATTCCCTTTAATCAAGTGGATTTCATATCAAGGCAATACCAAGTCATTACTAAAGCCTTAGATGAGGATACAAATGAAGAGTCTGATCCTTGCACTAGAGTGCTCACCTTCATAAGGTGGCAATTCCCTCCCCAGGATTGGTTGAAACTGAATACTGATGGAGCTTCAAAAGGGAATCCTGGTCGGGCTAGTGCTGGAGGGGTTTTACGGAACAGTTTGGGACAATGGGTTCGGGGATTCTCGCACAACATTGGAATATGTTCTTCAGTGGCTGCTGAATTATGGGGGGCTCTTACAGGGCTGCGGATGGCTTGGGAAGTTGGAGCAAGACAGGTCATTCTGGAGGTTGATTCCATGGTGGTGTACAAGCTGCTGGAGAACGAGGTTGATTGGCAATCGCCTAATGCTTCATTGATCTCTCTCTGCCATCACAACATCAACAAGGAATGGAAGGTTCACATCACACATGCTTACAGAGAAGCCAATGCTGTCGCTGATGCTCTTGCAAACAAAGCTCTCTCACTGCCAACAGGGGTTCATTACTTTGAGAGCCCACCCTTAGGGGTGGCGTCTTTGCTTTTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_460713.p1 GENE.S_Transcript_460713~~S_Transcript_460713.p1 ORF type:internal len:433 (+),score=63.11,RVT_3|PF13456.2|3.6e-19,zf-RVT|PF13966.2|2.9e-17,zf-RVT|PF13966.2|2.3e+02,zf-RVT|PF13966.2|6e+03 S_Transcript_460713:3-1298(+)
NIANGQSTRFWTDCWLGPEPLLSQATCNIADHEQLRSVVDYWDVDHGWKLEEIGGKVPALTLLRLVAVHVKTEGAHQDTLVWLRSTSGVFSTSSAYDLIRSKDKDIVDKIWQAIWSVSSPEKFRTFAWQAAHNRILTNQLRWKRGMAVSLVCEYCELNQEDTLHVLRDCHAASLIWNKFVKAQAKVDFYTWSLRDWLYFNCTTNLGNNQATDWPRLFFTIIWFLWRWRCYRVFGGHTRIPFNQVDFISRQYQVITKALDEDTNEESDPCTRVLTFIRWQFPPQDWLKLNTDGASKGNPGRASAGGVLRNSLGQWVRGFSHNIGICSSVAAELWGALTGLRMAWEVGARQVILEVDSMVVYKLLENEVDWQSPNASLISLCHHNINKEWKVHITHAYREANAVADALANKALSLPTGVHYFESPPLGVASLLF

Click here to download the sequence:
Link to NCBI Protein BLAST