Transcript Information: S_Transcript_460765.p1


Annotated TAIR IDAT5G61680.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24786416-24788015 | Reverse length=338
E-Value4E-61
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.11142823008846
Replicate 30.74516105388285
Condition 2: 8 Hour
Replicate 10.21540798300134
Replicate 20.45195653817629
Replicate 30
Condition 3: 24 Hour
Replicate 10.77229386077858
Replicate 20.45785477932015
Replicate 30.63692031326051


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_460765.p1 GENE.S_Transcript_460765~~S_Transcript_460765.p1 ORF type:5prime_partial len:198 (+),score=38.72,Pectinesterase|PF01095.15|6e-43 S_Transcript_460765:3-596(+)
GATGGAAAAAGGGTTGGTGCACAAGCGGCTGCAATGAGGATTTCTGGTGATAAGGCAGCCTTTTACAACTGTAAATTTACAGGATTTCAAGATACTATTTGTGACGATAAAGGAAAACATTTCTTCAAGGATTGTTATATTGAAGGAACTGTTGATTTTATCTTTGGCGAAGCTAGAACAATCTATTTGAACACAGAGCTACATGTTGTGCCGGGCGATCCAATGGCAATGATCGTGGCTCATGCGAGGAAAAATGCGGATGGAGAAGGTGGATATTCTTTTGCTCATTGCAACGTGACAGGATCTGACCATGCAACTGCTTTCTTAGCTAGAGCATGGATGGAAGCAGCACGAGCTGTTTACTCTTATTGTACTATGAGCGACGTCGTCAAACCTGAGGGTTTTTCAGATAACAATAAGCCCCCCGTTCAACAGACGGTCTTCTTTGGAGAGTACAAGAATACTGGTCCTGGAGCAGCTACTGATGGTCGAGTTAAATATGTGAAGAAGCTAACAAGTGCTCAAGCTCAAGAATTCATTAGCTTGGAATACATTGATGCTTCCAAATGGCTACTTCCAGCTCCTAGGGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_460765.p1 GENE.S_Transcript_460765~~S_Transcript_460765.p1 ORF type:5prime_partial len:198 (+),score=38.72,Pectinesterase|PF01095.15|6e-43 S_Transcript_460765:3-596(+)
DGKRVGAQAAAMRISGDKAAFYNCKFTGFQDTICDDKGKHFFKDCYIEGTVDFIFGEARTIYLNTELHVVPGDPMAMIVAHARKNADGEGGYSFAHCNVTGSDHATAFLARAWMEAARAVYSYCTMSDVVKPEGFSDNNKPPVQQTVFFGEYKNTGPGAATDGRVKYVKKLTSAQAQEFISLEYIDASKWLLPAPRV*

Click here to download the sequence:
Link to NCBI Protein BLAST