Transcript Information: S_Transcript_460766.p1


Annotated TAIR IDAT5G39150.1
Annotated Gene NameRmlC-like cupins superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:15670008-15670789 | Reverse length=221
E-Value6.1E-91
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.438540607307
Replicate 20.09938193494376
Replicate 30.16615077552793
Condition 2: 8 Hour
Replicate 10.096060316743842
Replicate 20.30232227891523
Replicate 30.86415598398573
Condition 3: 24 Hour
Replicate 10.39360150433503
Replicate 20
Replicate 30.56806406317829


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_460766.p1 GENE.S_Transcript_460766~~S_Transcript_460766.p1 ORF type:5prime_partial len:222 (+),score=42.35,Cupin_1|PF00190.18|3e-47,Cupin_2|PF07883.7|2.7e-08 S_Transcript_460766:3-668(+)
ATCTTGGGTTATGTTCTAATTGTAGCAACAACTTTCTGTATTGTATATGCCACTGATCCCACCCAGCTCCAAGATTTCTGTGTTGCGGTTAAAAATCCTGCTGATGGATTATTTGTGAATGGACTATTCTGCAAAGACCCAATGGTTGCAACACCAGAAGATTTCTTCTTCAGTGGGCTAGACAAAGCAGGCAACACCAACAACAACCTAGGCTCAAGTGTCACTCCTGTCGACGCAACAACCTTACCTGGACTCAACACTCTAGGGATCTCACTTGCGAGGCTCGACTTTGCACCTTATGGTCTCATTGCTCCTCACTTCCATCCTAGAGGTACCGAGGTTTTCACTGTCGTAGAGGGAACCATCTACGTTGGTTTCGTCACCTCCAACCAACCCAATGGCAAAAACAAGCTTTTTGCTAAGATCCTTAAGAAAGGAGATGTGTTTGTTTTCCCTCAAGGTCAAATTCATTTCCAGTTTAATGTGGGTAAAACTCCAGCTTTTGCTCTTTCTGGGCTGAGTAGCCAGAACCCTGGGGTTACTACTATTGCTAATGCTGTCTTTGGTGCTGACCCTCCTATCTCAGTTGATGTTCTTTCTAAGGCTTTTCAGCTTGATGATCATGTTGTCAAGTTTCTCCAGTCTCGCTTCTCCATGAGCTCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_460766.p1 GENE.S_Transcript_460766~~S_Transcript_460766.p1 ORF type:5prime_partial len:222 (+),score=42.35,Cupin_1|PF00190.18|3e-47,Cupin_2|PF07883.7|2.7e-08 S_Transcript_460766:3-668(+)
ILGYVLIVATTFCIVYATDPTQLQDFCVAVKNPADGLFVNGLFCKDPMVATPEDFFFSGLDKAGNTNNNLGSSVTPVDATTLPGLNTLGISLARLDFAPYGLIAPHFHPRGTEVFTVVEGTIYVGFVTSNQPNGKNKLFAKILKKGDVFVFPQGQIHFQFNVGKTPAFALSGLSSQNPGVTTIANAVFGADPPISVDVLSKAFQLDDHVVKFLQSRFSMSS*

Click here to download the sequence:
Link to NCBI Protein BLAST