Transcript Information: S_Transcript_460815.p1


Annotated TAIR IDAT5G28823.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: Zinc knuckle (CCHC-type) family protein (TAIR:AT2G07760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10837849-10839826 | Reverse length=568
E-Value0.0002
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.20907245408954
Replicate 20.43866369881817
Replicate 30.62693669426416
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_460815.p1 GENE.S_Transcript_460815~~S_Transcript_460815.p1 ORF type:complete len:102 (+),score=12.62,DUF4283|PF14111.2|2.7e-14 S_Transcript_460815:195-500(+)
ATGACTTTGAATTTGTCAAAGAAAACAACACCAGGGCACCGATTTTGGGTAACATTTCCTAATCTGAATCTACAATTCTGGTCACAAAAGGGGTTGAGTAAAGTGGCTGGTATGATAGGGAGGCCTATTCATGCGGATCGTTGTACTACTAAGAAAACCAGGATCTCTTATGCTAGAAATCTAATTGAGGTAGAACTGCTGGATGAGATAAAGCATGAAGTGAAGTTGGTTTCACCATGGGGACAAACTTTGACACAAAAGGTGGTTTATGAGAAAGTGCCAAAAAAATTGGCCATACTATTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_460815.p1 GENE.S_Transcript_460815~~S_Transcript_460815.p1 ORF type:complete len:102 (+),score=12.62,DUF4283|PF14111.2|2.7e-14 S_Transcript_460815:195-500(+)
MTLNLSKKTTPGHRFWVTFPNLNLQFWSQKGLSKVAGMIGRPIHADRCTTKKTRISYARNLIEVELLDEIKHEVKLVSPWGQTLTQKVVYEKVPKKLAILL*

Click here to download the sequence:
Link to NCBI Protein BLAST