Transcript Information: S_Transcript_46087.p1


Annotated TAIR IDAT3G07810.2
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:2492875-2495102 | Forward length=495
E-Value2E-98
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 176.585012288139
Replicate 282.566858737075
Replicate 384.643299667529
Condition 2: 8 Hour
Replicate 197.87329791837
Replicate 297.791355844395
Replicate 385.868425395613
Condition 3: 24 Hour
Replicate 192.149159178664
Replicate 277.492421241397
Replicate 391.911773170609


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_46087.p1 GENE.S_Transcript_46087~~S_Transcript_46087.p1 ORF type:complete len:458 (+),score=121.06,RRM_1|PF00076.18|3.2e-17,RRM_1|PF00076.18|1.3e-16,RRM_6|PF14259.2|1e-11,RRM_6|PF14259.2|4.2e-13,RRM_7|PF16367.1|3.8e-05,RRM_7|PF16367.1|4.2e-05,RRM_5|PF13893.2|0.25,RRM_5|PF13893.2|0.019,Nup35_RRM_2|PF14605.2|0.24,Nup35_RRM_2|PF14605.2|0.1 S_Transcript_46087:309-1682(+)
ATGGAGCCAGGGAAGCTATTTGTTGGTGGAATATCATGGGACACAAATGAAGATAAGTTGAGGGAATATTTTCAATCATTTGGTGAGGTTGTGGAAGCTGTGATCATGAAGGATCGAGCCACTGGTCGAGCTCGTGGTTTTGGCTTTGTTATCTATGCTGACCCTTCTGTTGCCGAGCGTGTTGTTAGGCAGAAACATATGATTGATGGTAGAACTGTTGAGGCAAAGAAGGCTGTTCCTAGAGATGATCAGCACATTCTAAACAGAAATCACAGCAGCCCCATTGCATCACCTCCACCTGCTCGCACAAAGAAGATCTTTGTTGGGGGTTTGGCATCCACTGTAACAGAGAGTGACTTTAAAAGGTATTTTGACCAGTTTGGGATCATTACTGATGTAGTTGTGATGTATGACCACAACACTCAGAGGCCAAGAGGCTTTGGATTTATCACTTATGACTCTGAAGAAGCTGTGGAGAGAGCACTGGTTAAAACCTTTCATGAACTTAATGGGAAAATGGTTGAGGTCAAAAGAGCTGTTCCTAAAGAGTTATCTCCAGGGTCAAGCAAGAGTCCATTAGGGGTTGGTAGCAGCAGTCTTAGTAGGGTTAGCAGCTTCCTCAATGGCTATCAGCAGGGATATAGTCCAAGCCCAATGGGAGGACATGGAGCCAAAATGGATGAAAGGCATACTCCAATTTCTTATGCTCGAGGTGGATTCCCATCATTCAGCCCTTCTAGTTATGGACCTGGGTTAAATTATGAGCCAAGGATGAGCCCAAGCTATGTTGAACCTGCAAATCTCTTTCCAAAATTAAGCTTTGAGCAAGGGTTAAATGCACTGCACAGTAGTAACTTTACTAGGCAAGGTAGCTTTTCTGAATTTGAAGGAGTTAATAGAGGAACTGGTTCTAATCCTGGTTCAACTTCTTGGAGTTTGTGGGGAAATGGGAGCATCAGTGATAGTACTTCTAATGGAATCAATGCTTCTATGGGCTTTAGAGCTGGAGATATTGAGTCTGATGCTTTTAAAAGCAGTGAAGCAATATGGGGTTCTTCTCCCATCTCAATTCAGGCTGGAGGTCATGGTTCTCTCACAAATGGACTCGGTCTTAACGGACGTGATGATATCAATCTCAGATCAGCTGTGGGATTATTTGGCAGGGACCTTAGAAGCAGGATTCCTACTGAATCATCATTTGCTTCATTAGATGGTGGTTATAACTCTAAATTTGATGACCTCTACAATGGTGGGGGTGAGCAAGCCTGGCCTTCAACTTCTTTGGGATTAAAGGGATCTGGGTCATTTGAATTTGGGCTGGGAAATGCAGTCTCAGATGTTCCACTCAATAACCCTGCTGGTTTATGCTGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_46087.p1 GENE.S_Transcript_46087~~S_Transcript_46087.p1 ORF type:complete len:458 (+),score=121.06,RRM_1|PF00076.18|3.2e-17,RRM_1|PF00076.18|1.3e-16,RRM_6|PF14259.2|1e-11,RRM_6|PF14259.2|4.2e-13,RRM_7|PF16367.1|3.8e-05,RRM_7|PF16367.1|4.2e-05,RRM_5|PF13893.2|0.25,RRM_5|PF13893.2|0.019,Nup35_RRM_2|PF14605.2|0.24,Nup35_RRM_2|PF14605.2|0.1 S_Transcript_46087:309-1682(+)
MEPGKLFVGGISWDTNEDKLREYFQSFGEVVEAVIMKDRATGRARGFGFVIYADPSVAERVVRQKHMIDGRTVEAKKAVPRDDQHILNRNHSSPIASPPPARTKKIFVGGLASTVTESDFKRYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVERALVKTFHELNGKMVEVKRAVPKELSPGSSKSPLGVGSSSLSRVSSFLNGYQQGYSPSPMGGHGAKMDERHTPISYARGGFPSFSPSSYGPGLNYEPRMSPSYVEPANLFPKLSFEQGLNALHSSNFTRQGSFSEFEGVNRGTGSNPGSTSWSLWGNGSISDSTSNGINASMGFRAGDIESDAFKSSEAIWGSSPISIQAGGHGSLTNGLGLNGRDDINLRSAVGLFGRDLRSRIPTESSFASLDGGYNSKFDDLYNGGGEQAWPSTSLGLKGSGSFEFGLGNAVSDVPLNNPAGLCW*

Click here to download the sequence:
Link to NCBI Protein BLAST