Transcript Information: S_Transcript_460877.p1


Annotated TAIR IDAT4G20520.1
Annotated Gene NameRNA binding;RNA-directed DNA polymerases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11045912-11047716 | Forward length=376
E-Value1E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.32738584763788
Condition 2: 8 Hour
Replicate 10
Replicate 20.13237780260193
Replicate 30.12612927576912
Condition 3: 24 Hour
Replicate 10
Replicate 20.13410539394288
Replicate 30.59697146520985


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_460877.p1 GENE.S_Transcript_460877~~S_Transcript_460877.p1 ORF type:5prime_partial len:169 (+),score=1.23,RVT_1|PF00078.23|1.6e-22 S_Transcript_460877:1-507(+)
CGTATAAGATTGTGTCTAAGATCATTGCTAATAGACTTGAAGCTTGATTATTTTGTGAGTCATTATCAAGCTACGTTTGTGCCAGGAAGATTTATTTCTGATAATACTATACTTATTAATGAGATTATGCATTTCATGGCTAAAAGCCACTCTAAAAAAGGGCTAATGGCTATAAAGATCGACATGGGTAAGGCGTATGATAAACTGGAGTGGTCTTTTTTGACTAAAATTCTGGAGGCAGTGGGATTTTCTAATAAGGTGATTCATCTTATACATCAATGCATTAGCACTACCTCTTATTCGGTATTGATCAATGGGAGACCTATTGGTTTGCAACGCCCTCAGAGGGGCCTTAGACAAGGAGACTCCTTGTCCCCCTTTCTTTTTGTTATTGCCATGGAGGCTCTTTCTAGACTTGCTTTCAGCAAGCGATTGGCGATCTGGTCGGAATTTCTATTGATAAAGAATGCCAACCTATTACCCATCTTATGTATGCTGACGATTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_460877.p1 GENE.S_Transcript_460877~~S_Transcript_460877.p1 ORF type:5prime_partial len:169 (+),score=1.23,RVT_1|PF00078.23|1.6e-22 S_Transcript_460877:1-507(+)
RIRLCLRSLLIDLKLDYFVSHYQATFVPGRFISDNTILINEIMHFMAKSHSKKGLMAIKIDMGKAYDKLEWSFLTKILEAVGFSNKVIHLIHQCISTTSYSVLINGRPIGLQRPQRGLRQGDSLSPFLFVIAMEALSRLAFSKRLAIWSEFLLIKNANLLPILCMLTI*

Click here to download the sequence:
Link to NCBI Protein BLAST