Transcript Information: S_Transcript_46125.p1


Annotated TAIR IDAT5G58620.1
Annotated Gene Namezinc finger (CCCH-type) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23693959-23695782 | Forward length=607
E-Value5.7E-217
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 169.629705817908
Replicate 290.43841753964
Replicate 3100.64010293896
Condition 2: 8 Hour
Replicate 152.731317149118
Replicate 256.797495037927
Replicate 349.124453388492
Condition 3: 24 Hour
Replicate 199.526042454991
Replicate 285.347485835642
Replicate 395.271199340589


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_46125.p1 GENE.S_Transcript_46125~~S_Transcript_46125.p1 ORF type:complete len:696 (+),score=203.90,Ank_4|PF13637.2|7.3e-09,Ank_4|PF13637.2|0.73,Ank_2|PF12796.3|3.6e-09,Ank|PF00023.26|1.4,Ank|PF00023.26|1.4e-05,Ank_3|PF13606.2|0.0047,Ank_3|PF13606.2|0.029,Ank_5|PF13857.2|0.00036,Ank_5|PF13857.2|0.059,Ank_5|PF13857.2|8.9e+03 S_Transcript_46125:677-2764(+)
ATGTGCAGTGGTTCCAAAAGGAAAGTAACTTCTGTGGGGTTGGTGATGGAGGAGAGTAATGAGGTTCAAAAGAAAGATTTAGTTGGGGCTAATCAAACCTCTTCACTCTTGCTTGAGTTATCAGCCACTAATGATATTGAGGGATTGAAGCATGCTGTGGAGGAAGAGGGTTATGATGTGGATGAAGCTGGGGTTTGGTATGGGAGGAGACTTGGGTCGAAAAAGATGGGATTCGAAGAGAGGACTCCTTTGATGGTGGCTGCCATGTTTGGCTGCAAGGATGTGTTGAACTATATCCTAGGAAAGAGCCATGTCGATGTCAATCGAGCTTGTGGGTCTGATGGTGCCACTGCCCTTCATTGTGCTGCTGCTGGTGGTTCTCTATACTCTCATGAGGTCATCAGGCTCCTGATTGATTCATCTGCTGATGTGAACCGGGTCGATGTTCATGGAAATCGGCCTGTTGATGTTATTTCTCCTTGCTTAGGTTCGAAGCTGAAGAGGAAAACTCTAGAGCTTATGTTGAAGAAGGGTGGTTCTGCTGATGAAGGAGCTGATCAATCAGAAGTTGAGGAGATACAGCAGCTGCAAGAGGCTGTGTCTCCGAAATCATCTAATGATGGGAGTGGATCGGAGAAGGAGTATCCGGTTGATCCATCCCTACCTGACATCAAGAATGGGATATATGGAACTGATGAGTTCAGGATGTATACTTTTAAGGTTAAGCCTTGCTCAAGGGCTTACTCTCATGATTGGACTGAGTGCCCTTTTGTCCATCCTGGGGAGAATGCAAGGCGACGTGACCCAAGGAAGTATCATTATAGCTGTGTCCCATGTCCGGAGTTCAGAAAAGGGTCATGCCCCAAGGGAGATGCTTGTGAGTATGCACATGGTATCTTTGAGTGCTGGCTTCACCCTGCTCAGTATCGAACCCGTCTTTGCAAGGACGAGACCAATTGTACTCGAAGGGTATGTTTCTTTGCTCACAAGCGAGAGGAGCTCCGCCCCTTGTATCCTTCCACTGGATCTGCTGTTCCCTCTCCTAGGTCGTACTCATCGAGTGCTAATGCATTTGAAATGGCATCTATGAGCCCTCTTGCACTGGGTTCCCCTTCTGTTTTGATGCCCTCAACCTCCACTCCCCCGATGACCCCAACTGGGGCCTCTTCTCCAATGGGAGGGGCAGCTTCTTGGCAAAACCAGCTTAATATCACTCCCCCAACCTTGCAGCTTCCTAGTAGCAGGTTAAAAGCTGCACTAAGTGCCAGGGATATGGACTTGGAGGCTGAGTTTCGCAGGCGGCAATTGTTGGATGAGCTTGCTGGTCTGTCTTTGTCCTCCCCAACCAACTGGAGCAGTTCCTTTAACAACTCACCAGTGTTTCCTTCCTCCACTGATCGGGCTGGGGAGTTAGGAAGGCTTGGTGCTCTGAAGCCGGCTAACCTCAATGATCTCTATGGATCCCTTGATCCTGCTTTGCTGGCCCAAGCCCAAACCCAGTTGCAATCTCCGAGTGGGAGGCAGATTCACCAGAACATGAACCAGCAGCTCCGCTCAAGCTACTCTTCTGGCATGCCTTCCTCCCCTGTGAGGGCTCCATCATTTGGTATGGAACCATGTGGATCACCCGTTTCAAATCCTAGACTGTCTGCTTTTGCTAAGCGGAGCCAGAGCTTCATTGATAGAGGAGTGGTCAATCAACAACCACCAGGAGTAGGTGGGCTTTCTTCGCCTGCTTTTTCAAATGCAATGTCGTCTCATCTCTCAGATTGGGGTTCTCCAGATGGTAAAGTGGACTGGGGGATTCAGGGAGATGAGCTGAATAAGCTTAGAAAATCAGCTTCATTTGGCTTCCGAAGCAATGGGAGTCATGCTGGTGGAAACCCTCATTCATCAAAAGCTGTCTTTAATGAGCCTGATGTTTCTTGGGTTCAGTCTCTTGTGAAGGATGCTCCAACCGCGAAGTCAGCACATCTCGAGTTTGAAGAGCAGCTGAAGCAGCAGTATCATCTCAGCAGCGGTGGTTCTGAGAAGATTCCGCCTTGGGTTGAGCAGTTTTATATGGAGCAAGAGCCAATGGCAGCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_46125.p1 GENE.S_Transcript_46125~~S_Transcript_46125.p1 ORF type:complete len:696 (+),score=203.90,Ank_4|PF13637.2|7.3e-09,Ank_4|PF13637.2|0.73,Ank_2|PF12796.3|3.6e-09,Ank|PF00023.26|1.4,Ank|PF00023.26|1.4e-05,Ank_3|PF13606.2|0.0047,Ank_3|PF13606.2|0.029,Ank_5|PF13857.2|0.00036,Ank_5|PF13857.2|0.059,Ank_5|PF13857.2|8.9e+03 S_Transcript_46125:677-2764(+)
MCSGSKRKVTSVGLVMEESNEVQKKDLVGANQTSSLLLELSATNDIEGLKHAVEEEGYDVDEAGVWYGRRLGSKKMGFEERTPLMVAAMFGCKDVLNYILGKSHVDVNRACGSDGATALHCAAAGGSLYSHEVIRLLIDSSADVNRVDVHGNRPVDVISPCLGSKLKRKTLELMLKKGGSADEGADQSEVEEIQQLQEAVSPKSSNDGSGSEKEYPVDPSLPDIKNGIYGTDEFRMYTFKVKPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPEFRKGSCPKGDACEYAHGIFECWLHPAQYRTRLCKDETNCTRRVCFFAHKREELRPLYPSTGSAVPSPRSYSSSANAFEMASMSPLALGSPSVLMPSTSTPPMTPTGASSPMGGAASWQNQLNITPPTLQLPSSRLKAALSARDMDLEAEFRRRQLLDELAGLSLSSPTNWSSSFNNSPVFPSSTDRAGELGRLGALKPANLNDLYGSLDPALLAQAQTQLQSPSGRQIHQNMNQQLRSSYSSGMPSSPVRAPSFGMEPCGSPVSNPRLSAFAKRSQSFIDRGVVNQQPPGVGGLSSPAFSNAMSSHLSDWGSPDGKVDWGIQGDELNKLRKSASFGFRSNGSHAGGNPHSSKAVFNEPDVSWVQSLVKDAPTAKSAHLEFEEQLKQQYHLSSGGSEKIPPWVEQFYMEQEPMAA*

Click here to download the sequence:
Link to NCBI Protein BLAST