Transcript Information: S_Transcript_461562.p1


Annotated TAIR IDAT2G17210.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:7485398-7487602 | Reverse length=715
E-Value1E-69
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.20471539411677
Replicate 20.084856882913519
Replicate 30.14186720064308
Condition 2: 8 Hour
Replicate 10.32808292795589
Replicate 20.086045571691256
Replicate 30.24595208774978
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.0970078630966


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_461562.p1 GENE.S_Transcript_461562~~S_Transcript_461562.p1 ORF type:5prime_partial len:260 (+),score=54.17,PPR|PF01535.16|0.15,PPR|PF01535.16|1.8e-07,PPR|PF01535.16|0.1,PPR|PF01535.16|0.43,PPR|PF01535.16|3e+03,PPR|PF01535.16|4.3e+03,PPR_2|PF13041.2|1.4,PPR_2|PF13041.2|1.7e-10,PPR_2|PF13041.2|19,PPR_2|PF13041.2|21,PPR_2|PF13041.2|7.2e+03,PPR_2|PF13041.2|1.1e+04,PPR_3|PF13812.2|0.76,PPR_3|PF13812.2|2.7e-05,PPR_3|PF13812.2|33,PPR_3|PF13812.2|0.13,PPR_1|PF12854.3|63,PPR_1|PF12854.3|0.00027,PPR_1|PF12854.3|1.4e+02,PPR_1|PF12854.3|1.3e+03,PPR_1|PF12854.3|0.23 S_Transcript_461562:2-781(+)
TTTTCTGGGGAGGTATCTGTAGGAACCGCAATAGTAGACATGTACTCGAAATGTGGGGCAGTAGAAGAAGCAAGAAAATCATTCGAGCAAATACCCCAGAAAAACATCATGTCATGGAGTACTATGATATCTGCATACGGCATGAATGGTAGAGCCCAAGATGCATTAAGTCTAGTTACAGAAATGAAGTCACATGGTTTGAAACCAAATGCAGTTACAGCTCTTTCAGTCCTAGCTGCTTGTAGTCATGGTGGTCTTATTCACTCTGGCCTATCCTTCTTCAAAGAGATGGTTGAAGATCTTGGGATTCAACCGGGGTTAGAGCATTATGCTTGTTTGGTTGACATGTTGAGCCGGTCAGGAAAGTTGGACAATGCCATGGACTTGATCAAAAGTTCCGGAGAAAATGTTGCAAGCAAGGCGAGCATTTGGGGGGCGGTGCTATGTGCTAGCAGCAGGTACAAGAACTCTGAGATTGGCGAAGGCGCAGCTTCTCAAGTACTTGAATTGGAACCTTTTGTTTCGTCTGGATACATGCTAGCATCAAGCTTGCATGCTGGCATGGGATCATGGACAGATGCAGCGAAGATCCGAAGGTTGGTGAAGGAGAGAGGAGTTACAGTAATAGCTGGTTATAGCATGGTCCGTGTAGATGACAAGGCTTTTAAGTTTGTAGCTGGAGATAAGGGCATGCCACTGGCTGCTCACAGTTGCTCTATCGTTGAGCAATTGCACAGATGTATGCAGCCTGACGACAATAGTGAGGAAGTTGTTCAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_461562.p1 GENE.S_Transcript_461562~~S_Transcript_461562.p1 ORF type:5prime_partial len:260 (+),score=54.17,PPR|PF01535.16|0.15,PPR|PF01535.16|1.8e-07,PPR|PF01535.16|0.1,PPR|PF01535.16|0.43,PPR|PF01535.16|3e+03,PPR|PF01535.16|4.3e+03,PPR_2|PF13041.2|1.4,PPR_2|PF13041.2|1.7e-10,PPR_2|PF13041.2|19,PPR_2|PF13041.2|21,PPR_2|PF13041.2|7.2e+03,PPR_2|PF13041.2|1.1e+04,PPR_3|PF13812.2|0.76,PPR_3|PF13812.2|2.7e-05,PPR_3|PF13812.2|33,PPR_3|PF13812.2|0.13,PPR_1|PF12854.3|63,PPR_1|PF12854.3|0.00027,PPR_1|PF12854.3|1.4e+02,PPR_1|PF12854.3|1.3e+03,PPR_1|PF12854.3|0.23 S_Transcript_461562:2-781(+)
FSGEVSVGTAIVDMYSKCGAVEEARKSFEQIPQKNIMSWSTMISAYGMNGRAQDALSLVTEMKSHGLKPNAVTALSVLAACSHGGLIHSGLSFFKEMVEDLGIQPGLEHYACLVDMLSRSGKLDNAMDLIKSSGENVASKASIWGAVLCASSRYKNSEIGEGAASQVLELEPFVSSGYMLASSLHAGMGSWTDAAKIRRLVKERGVTVIAGYSMVRVDDKAFKFVAGDKGMPLAAHSCSIVEQLHRCMQPDDNSEEVVQ*

Click here to download the sequence:
Link to NCBI Protein BLAST