Transcript Information: S_Transcript_461711.p4


Annotated TAIR IDAT5G16486.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5383597-5384226 | Reverse length=209
E-Value3E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1987838394225
Replicate 21.5901109591002
Replicate 31.9938093063352
Condition 2: 8 Hour
Replicate 12.3054476018522
Replicate 22.4185782313218
Replicate 32.1123812941873
Condition 3: 24 Hour
Replicate 10.78720300867006
Replicate 21.2250708960188
Replicate 30.90890250108527


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_461711.p4 GENE.S_Transcript_461711~~S_Transcript_461711.p4 ORF type:complete len:111 (+),score=15.33 S_Transcript_461711:3214-3546(+)
ATGAAAGAGGATTCACTATGGGTCAAATGGATACACAATGTGTATATTGTACAGGGAGACTGGAGGAATCATAGACCACCAGTGGATGCTTCTTGGTCTTGGAAGACAATTTGTAAGGTGAGAGATGCCCTGAGGAATGGATACCAGGATGATAGATGGATAGGTTCCCCTAAGGGGGTGTATACTGCTGCTAGTGGTTATAAATGGTTGAGAAAAGTGGGTGAAAGGTTTAAATGGGATAAGATTGTATGGAATAGATACAATATTCCTAAGCATTCATTCGTGGCCTGGATTCTGATGTTGGGCAAAGCTAGAACTAGAGACTCTCTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_461711.p4 GENE.S_Transcript_461711~~S_Transcript_461711.p4 ORF type:complete len:111 (+),score=15.33 S_Transcript_461711:3214-3546(+)
MKEDSLWVKWIHNVYIVQGDWRNHRPPVDASWSWKTICKVRDALRNGYQDDRWIGSPKGVYTAASGYKWLRKVGERFKWDKIVWNRYNIPKHSFVAWILMLGKARTRDSL*

Click here to download the sequence:
Link to NCBI Protein BLAST