Transcript Information: S_Transcript_461780.p1


Annotated TAIR IDAT4G20520.1
Annotated Gene NameRNA binding;RNA-directed DNA polymerases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11045912-11047716 | Forward length=376
E-Value1E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.11421888942137
Replicate 20.18938016787566
Replicate 30.15830674749872
Condition 2: 8 Hour
Replicate 10.27457584099313
Replicate 20
Replicate 30.091484324484899
Condition 3: 24 Hour
Replicate 10.093754864766499
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_461780.p1 GENE.S_Transcript_461780~~S_Transcript_461780.p1 ORF type:3prime_partial len:233 (+),score=32.12,RVT_1|PF00078.23|1.9e-36 S_Transcript_461780:3-698(+)
ATGCTAAAAGCCATCAACACTACAGCCATTACTTTGTTTCCTAAGGTGACTAACCCTACTTCACCTGCTGATTATAAACCCATAGCTTGCTGTAATGTGCTATATAAGGTAATAACAAATATCCTTACTGACAAGATGAAGTTGGTGGTTAGTAGCTTAGTTGGTCCAGAACATGCTGCATTCATAGAAGGCAGGTACATTACTCATAACATCCTGCTTGCTCATAAGTTTGTTCATGCATATGGTAGAAAGAATGTGTCCCCCAGAGCAATGATTAAAATAGACATTAAAAAATATTATGACACTGTATCATGGACCTTCCTAAGGAAGACATTGAGTTGGTTTGGTTTCCCTGATGAGTTTGTACAAAGAGTTATGGTGTGTCTAGAAACTGCACAGTTCTCTGTCAATGTAAATGGTGGATTGCAAGGGTTCTTCGAGGGAGATTGTGGGTTGCGGCAAGGAGACCCTATGTCTCCCTACTTATTTGTCTTGGGCATGGAGGTTCTATCAAGAATGTTAAGAAGGTGCTTTGAGTTTAAGAAATTCAAGGCTCATCCCAAATGCTCAAGAATGAAGCTAAATCATCTAGTCTTTGTTGATGATTTGTTGATTTTCTCAAGAGGGGATTTGAACTCCATCAGCTGTGTGTTGAAGGTGTTTACAATTTTTTCTCAGATGTCTGGACTTTGGGCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_461780.p1 GENE.S_Transcript_461780~~S_Transcript_461780.p1 ORF type:3prime_partial len:233 (+),score=32.12,RVT_1|PF00078.23|1.9e-36 S_Transcript_461780:3-698(+)
MLKAINTTAITLFPKVTNPTSPADYKPIACCNVLYKVITNILTDKMKLVVSSLVGPEHAAFIEGRYITHNILLAHKFVHAYGRKNVSPRAMIKIDIKKYYDTVSWTFLRKTLSWFGFPDEFVQRVMVCLETAQFSVNVNGGLQGFFEGDCGLRQGDPMSPYLFVLGMEVLSRMLRRCFEFKKFKAHPKCSRMKLNHLVFVDDLLIFSRGDLNSISCVLKVFTIFSQMSGLWA

Click here to download the sequence:
Link to NCBI Protein BLAST