Transcript Information: S_Transcript_461975.p1


Annotated TAIR IDAT5G48930.1
Annotated Gene Namehydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase
Annotated Gene Symbol(s)HCT
Annotation TypeHomolog
Chromosome Positionchr5:19836654-19838092 | Reverse length=433
E-Value2E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.7248677379232
Replicate 20.42923715092441
Replicate 31.1481859040374
Condition 2: 8 Hour
Replicate 10
Replicate 20.26114998412132
Replicate 31.4099977014968
Condition 3: 24 Hour
Replicate 10.67999637324807
Replicate 20.70548829809642
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_461975.p1 GENE.S_Transcript_461975~~S_Transcript_461975.p1 ORF type:complete len:257 (+),score=30.16,Transferase|PF02458.11|5.1e-47 S_Transcript_461975:83-853(+)
ATGAGCATCAAAGTAAAGCAAAGAAGCATGGTGAAGCCAGCTGAGGAGAGCCCAAGGCGAAAGCTTTGGTTGTCAAGCCTAGATTTGTACATCAGCCGTCCAAACACACACGTCCCTTCAGTTCAGTTCTACCGTTGTCCAAAGGATGTTGATAATGATGTCTTCATGAATGCCGAAAATCTGAAAGCTCTAAGTAAAGCTTTGGTGCCATTCTATCCCCTGGCCGGGAGGCTAATTATAAACGACCACGGTAGAACTCGAATGGAGATCGATTGCAACGGAGAAGGGGCCTTGTTTATGGAGGCCGAAACTCAAGAATACAGTCTTGCTGATTTTGAACAGAATGACTTTATACCAAGTGATGGAATGTTGGAGCTTGTTATCCCCAAGTGCGACTACTCCGGGGGACTCTCGTCATTTCCTTTGTTGATAGTGCAGCTCACCAGGTTTACTTGTGGTGGGGTTGCACTTGGGTTTGCCCAGAATCATCAGATAGGAGATGGAGCTGCTTATCTACACTTCATTTTGTCATGGTCTAGACTTGCAAGGGATCTTCACCTTGACTTTCCTCCTGTCCTTGATCGGGCTTCCTTCTTTGCTCCTCGTTGTCCCCGCAATGTTACCTTTTATCACTTGGAGTATGATGACCCTCCCTTGCCCATACGACCCCTCCAAGGTCACTTCCTCTTCTTTACTTTTTGGCTTTTCCGATCATTAATATCTTGTGTCATCAAATCGATTCTGTTAATTTTAATTTCCTTGCCGGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_461975.p1 GENE.S_Transcript_461975~~S_Transcript_461975.p1 ORF type:complete len:257 (+),score=30.16,Transferase|PF02458.11|5.1e-47 S_Transcript_461975:83-853(+)
MSIKVKQRSMVKPAEESPRRKLWLSSLDLYISRPNTHVPSVQFYRCPKDVDNDVFMNAENLKALSKALVPFYPLAGRLIINDHGRTRMEIDCNGEGALFMEAETQEYSLADFEQNDFIPSDGMLELVIPKCDYSGGLSSFPLLIVQLTRFTCGGVALGFAQNHQIGDGAAYLHFILSWSRLARDLHLDFPPVLDRASFFAPRCPRNVTFYHLEYDDPPLPIRPLQGHFLFFTFWLFRSLISCVIKSILLILISLPG*

Click here to download the sequence:
Link to NCBI Protein BLAST