Transcript Information: S_Transcript_461976.p1


Annotated TAIR IDAT5G48930.1
Annotated Gene Namehydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase
Annotated Gene Symbol(s)HCT
Annotation TypeOrtholog
Chromosome Positionchr5:19836654-19838092 | Reverse length=433
E-Value1.1E-125
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.359423299601
Replicate 213.82009189285
Replicate 311.263684453743
Condition 2: 8 Hour
Replicate 14.8661964482048
Replicate 24.3542524198126
Replicate 33.5287980375137
Condition 3: 24 Hour
Replicate 114.221165762333
Replicate 215.46412199281
Replicate 38.8587493771884


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_461976.p1 GENE.S_Transcript_461976~~S_Transcript_461976.p1 ORF type:complete len:447 (+),score=70.60,Transferase|PF02458.11|2.9e-90 S_Transcript_461976:83-1423(+)
ATGAGCATCAAAGTAAAGCAAAGAAGCATGGTGAAGCCAGCTGAGGAGAGCCCAAGGCGAAAGCTTTGGTTGTCAAGCCTAGATTTGTACATCAGCCGTCCAAACACACACGTCCCTTCAGTTCAGTTCTACCGTTGTCCAAAGGATGTTGATAATGATGTCTTCATGAATGCCGAAAATCTGAAAGCTCTAAGTAAAGCTTTGGTGCCATTCTATCCCCTGGCCGGGAGGCTAATTATAAACGACCACGGTAGAACTCGAATGGAGATCGATTGCAACGGAGAAGGGGCCTTGTTTATGGAGGCCGAAACTCAAGAATACAGTCTTGCTGATTTTGAACAGAATGACTTTATACCAAGTGATGGAATGTTGGAGCTTGTTATCCCCAAGTGCGACTACTCCGGGGGACTCTCGTCATTTCCTTTGTTGATAGTGCAGCTCACCAGGTTTACTTGTGGTGGGGTTGCACTTGGGTTTGCCCAGAATCATCAGATAGGAGATGGAGCTGCTTATCTACACTTCATTTTGTCATGGTCTAGACTTGCAAGGGATCTTCACCTTGACTTTCCTCCTGTCCTTGATCGGGCTTCCTTCTTTGCTCCTCGTTGTCCCCGCAATGTTACCTTTTATCACTTGGAGTATGATGACCCTCCCTTGCCCATACGACCCCTCCAAGGTGATCTGCAAATAGAGACAACCACCACAAGTGTAGGGGTGTGCAAATTTTCCAAGGAACAAATTAATGCCTTAAAACTAGAAGCGACATTGTCACAGGAAGATAGCCAATACAAGCTAAGTACATTTGAGGTGCTAGCTGGTCACATATGGCGCAGTGCATGCAAGGCTCGTGGTCTCGCACAAGATCAAGAGGTCAAACTGAGCATACCAGTTGATGGACGGTCAAGATTGTCCCTACTACAAGGGTATTTTGGGAATGCCATCTTTCATGCAGCTTGTATGGAAAAAGCTGGGGATATTACTGAAAATCCATTGTGGTATGCTGCGACTCAGATTCACAAGGCTTTGAAGAAGATGAAGGATGAGGAGTACTTGAGATCAGCTATTGATTACTTGGAATCACAGCCTGATATAATGGCAATAGCTCGTGGAACCAATGCCTATAAGTTTCCTAAGTTACTTATAAACTCATGGGCTGGATTTCCTTTTCATGAATCGGATTTTGGGTGGGGCGGGCCCGTTTTCGGGGGCAATGGTGGAATCAGGTCCGAGGGGCAATGTTTTATACTCCAAAGCCCAGATGGGGATGGCAGCTTGCTAGTTACTGCTAAACTCTTCACTCCTCACATGACCTTGTTTCAAAAATATATGTATGACTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_461976.p1 GENE.S_Transcript_461976~~S_Transcript_461976.p1 ORF type:complete len:447 (+),score=70.60,Transferase|PF02458.11|2.9e-90 S_Transcript_461976:83-1423(+)
MSIKVKQRSMVKPAEESPRRKLWLSSLDLYISRPNTHVPSVQFYRCPKDVDNDVFMNAENLKALSKALVPFYPLAGRLIINDHGRTRMEIDCNGEGALFMEAETQEYSLADFEQNDFIPSDGMLELVIPKCDYSGGLSSFPLLIVQLTRFTCGGVALGFAQNHQIGDGAAYLHFILSWSRLARDLHLDFPPVLDRASFFAPRCPRNVTFYHLEYDDPPLPIRPLQGDLQIETTTTSVGVCKFSKEQINALKLEATLSQEDSQYKLSTFEVLAGHIWRSACKARGLAQDQEVKLSIPVDGRSRLSLLQGYFGNAIFHAACMEKAGDITENPLWYAATQIHKALKKMKDEEYLRSAIDYLESQPDIMAIARGTNAYKFPKLLINSWAGFPFHESDFGWGGPVFGGNGGIRSEGQCFILQSPDGDGSLLVTAKLFTPHMTLFQKYMYDF*

Click here to download the sequence:
Link to NCBI Protein BLAST