Transcript Information: S_Transcript_461977.p1


Annotated TAIR IDAT5G48930.1
Annotated Gene Namehydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase
Annotated Gene Symbol(s)HCT
Annotation TypeHomolog
Chromosome Positionchr5:19836654-19838092 | Reverse length=433
E-Value6E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.95730220270433
Replicate 20.47617531419097
Replicate 30.39804466367483
Condition 2: 8 Hour
Replicate 10.76710037111989
Replicate 21.6094855136494
Replicate 31.07345995133
Condition 3: 24 Hour
Replicate 10.31431487036826
Replicate 21.9565880497566
Replicate 30.72581422748535


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_461977.p1 GENE.S_Transcript_461977~~S_Transcript_461977.p1 ORF type:complete len:139 (+),score=28.50,Transferase|PF02458.11|2e-25 S_Transcript_461977:267-683(+)
ATGGAGATCGATTGCAACGGAGAAGGGGCCTTGTTTATGGAGGCCGAAACTCAAGATCAATACAGTCTTGCTGATTTTGAACAGCATGATTTTACACCAAGTGATGGAATGTTTGAGCTTGTGATACCCAAGTGTGACTACTCCGGAGGACTCTCATCATTTCCTCTGTTGATAGTGCAGCTCACCAGGTTTACTTGTGGTGGGGTTGCACTTGGGTTTGCCCAGAATCATCAGATAGGAGATGGAGCTGCTTATCTACACTTCATTTTGTCATGGTCTAGACTTGCAAGGGATCTTCACCTTGACTTTCCTCCTGTCCTTGATCGGGCTTCTTTCCTTGCTTCTCGTTGTCCCAGCAATGTTCCCTTTTATCACTTGACCCTCCCTTGCCCATACGACCCCTCCAAGTTGAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_461977.p1 GENE.S_Transcript_461977~~S_Transcript_461977.p1 ORF type:complete len:139 (+),score=28.50,Transferase|PF02458.11|2e-25 S_Transcript_461977:267-683(+)
MEIDCNGEGALFMEAETQDQYSLADFEQHDFTPSDGMFELVIPKCDYSGGLSSFPLLIVQLTRFTCGGVALGFAQNHQIGDGAAYLHFILSWSRLARDLHLDFPPVLDRASFLASRCPSNVPFYHLTLPCPYDPSKLN*

Click here to download the sequence:
Link to NCBI Protein BLAST