Transcript Information: S_Transcript_461980.p1


Annotated TAIR IDAT5G48930.1
Annotated Gene Namehydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase
Annotated Gene Symbol(s)HCT
Annotation TypeHomolog
Chromosome Positionchr5:19836654-19838092 | Reverse length=433
E-Value7E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.010800603866
Replicate 214.316299001765
Replicate 310.655803070525
Condition 2: 8 Hour
Replicate 13.2225034257001
Replicate 24.6732306047429
Replicate 33.1263243153973
Condition 3: 24 Hour
Replicate 112.524399867941
Replicate 214.00119915161
Replicate 38.6315440853064


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_461980.p1 GENE.S_Transcript_461980~~S_Transcript_461980.p1 ORF type:internal len:225 (-),score=37.76,Transferase|PF02458.11|1.6e-45 S_Transcript_461980:2-673(-)
GTTGGCGTTCATGTTCAGCAAATTAGAAAGAGAGAGAAAAAAAAAAGAAAGAAAAAGATGAGCATCAAAGTAAAGCAAAGAAGCATGGTGAAGCCAGCTGAGGAGAGCCCAAGGCGAAAGCTTTGGTTGTCAAGCCTAGATTTGTACATCAGCCGTCCAAACACACACGTCCCTTCAGTTCAGTTCTACCGTTGTCCAAAGGATGTTGATAATGATGTCTTCATGAATGCCGAAAATCTGAAAGCTCTAAGTAAAGCTTTGGTGCCATTCTATCCCCTGGCCGGGAGGCTAATTATAAACGACCACGGTAGAACTCGAATGGAGATCGATTGCAACGGAGAAGGGGCCTTGTTTATGGAGGCCGAAACTCAAGAATACAGTCTTGCTGATTTTGAACAGAATGACTTTATACCAAGTGATGGAATGTTGGAGCTTGTTATCCCCAAGTGCGACTACTCCGGGGGACTCTCGTCATTTCCTTTGTTGATAGTGCAGCTCACCAGGTTTACTTGTGGTGGGGTTGCACTTGGGTTTGCCCAGAATCATCAGATAGGAGATGGAGCTGCTTATCTACACTTCATTTTGTCATGGTCTAGACTTGCAAGGGATCTTCACCTTGACTTTCCTCCTGTCCTTGATCGGGCTTCCTTCTTTGCTCCTCGTTGTCCCCGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_461980.p1 GENE.S_Transcript_461980~~S_Transcript_461980.p1 ORF type:internal len:225 (-),score=37.76,Transferase|PF02458.11|1.6e-45 S_Transcript_461980:2-673(-)
VGVHVQQIRKREKKKRKKKMSIKVKQRSMVKPAEESPRRKLWLSSLDLYISRPNTHVPSVQFYRCPKDVDNDVFMNAENLKALSKALVPFYPLAGRLIINDHGRTRMEIDCNGEGALFMEAETQEYSLADFEQNDFIPSDGMLELVIPKCDYSGGLSSFPLLIVQLTRFTCGGVALGFAQNHQIGDGAAYLHFILSWSRLARDLHLDFPPVLDRASFFAPRCPR

Click here to download the sequence:
Link to NCBI Protein BLAST